Gene : Glyma.11G103900 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00076//PF00641 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zn-finger in Ran binding protein and others (zf-RanBP) Genomic Order:  1039
Name:  ? Glyma.11G103900 Secondary Identifier:  ? PAC:30530198
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G103900 0.5kb upstream 0.5kb upstream 5045 true Chr11: 7887039-7892083 Glycine max
Glyma.11G103900 0.5kb upstream 0.5kb upstream 500 false Chr11: 7891584-7892083 Glycine max
Glyma.11G103900 0.5kb downstream 0.5kb downstream 5045 true Chr11: 7886539-7891583 Glycine max
Glyma.11G103900 0.5kb downstream 0.5kb downstream 500 false Chr11: 7886539-7887038 Glycine max
Glyma.11G103900 1.0kb upstream 1.0kb upstream 5545 true Chr11: 7887039-7892583 Glycine max
Glyma.11G103900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7891584-7892583 Glycine max
Glyma.11G103900 1.0kb downstream 1.0kb downstream 5545 true Chr11: 7886039-7891583 Glycine max
Glyma.11G103900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7886039-7887038 Glycine max
Glyma.11G103900 2.0kb upstream 2.0kb upstream 6545 true Chr11: 7887039-7893583 Glycine max
Glyma.11G103900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7891584-7893583 Glycine max
Glyma.11G103900 2.0kb downstream 2.0kb downstream 6545 true Chr11: 7885039-7891583 Glycine max
Glyma.11G103900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7885039-7887038 Glycine max
Glyma.11G103900 5.0kb upstream 5.0kb upstream 9545 true Chr11: 7887039-7896583 Glycine max
Glyma.11G103900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7891584-7896583 Glycine max
Glyma.11G103900 5.0kb downstream 5.0kb downstream 9545 true Chr11: 7882039-7891583 Glycine max
Glyma.11G103900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7882039-7887038 Glycine max
Glyma.11G103900 10.0kb upstream 10.0kb upstream 14545 true Chr11: 7887039-7901583 Glycine max
Glyma.11G103900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7891584-7901583 Glycine max
Glyma.11G103900 10.0kb downstream 10.0kb downstream 14545 true Chr11: 7877039-7891583 Glycine max
Glyma.11G103900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7877039-7887038 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303291 5265 Fabidae View MSA
124065854 5270 Rosid View MSA
123739072 5271 Pentapetalae View MSA
122786917 5272 Eudicot View MSA
122043318 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349029 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.29873 0.0 17.4888    
cufflinks 5.95444 0.0 16.6613    
cufflinks 4.75342 0.0 13.5588   Low
cufflinks 7.73437 0.0 21.1227    
cufflinks 7.19434 0.0 19.7459    
cufflinks 5.68478 0.0 15.9458    
cufflinks 5.57699 0.0 15.6633    
cufflinks 8.67653 0.0 23.5559   High
cufflinks 7.32841 0.0 20.1304    
cufflinks 3.158        
cufflinks 2.061       Low
cufflinks 3.611        
cufflinks 3.56        
cufflinks 4.254        
cufflinks 3.815        
cufflinks 3.996        
cufflinks 1.444       Low
cufflinks 3.673        
cufflinks 4.178        
cufflinks 5.319       High
cufflinks 2.999        
cufflinks 4.94       High
cufflinks 3.541        
cufflinks 2.3       Low
cufflinks 4.902       High
cufflinks 2.289       Low

0 Strain