Gene : Glyma.11G065900 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12320:SF16 - PROTEIN PHOSPHATASE 2C 80-RELATED Genomic Order:  659
Name:  ? Glyma.11G065900 Secondary Identifier:  ? PAC:30530003
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G065900 0.5kb upstream 0.5kb upstream 3616 true Chr11: 4958846-4962461 Glycine max
Glyma.11G065900 0.5kb upstream 0.5kb upstream 500 false Chr11: 4961962-4962461 Glycine max
Glyma.11G065900 0.5kb downstream 0.5kb downstream 3616 true Chr11: 4958346-4961961 Glycine max
Glyma.11G065900 0.5kb downstream 0.5kb downstream 500 false Chr11: 4958346-4958845 Glycine max
Glyma.11G065900 1.0kb upstream 1.0kb upstream 4116 true Chr11: 4958846-4962961 Glycine max
Glyma.11G065900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4961962-4962961 Glycine max
Glyma.11G065900 1.0kb downstream 1.0kb downstream 4116 true Chr11: 4957846-4961961 Glycine max
Glyma.11G065900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4957846-4958845 Glycine max
Glyma.11G065900 2.0kb upstream 2.0kb upstream 5116 true Chr11: 4958846-4963961 Glycine max
Glyma.11G065900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4961962-4963961 Glycine max
Glyma.11G065900 2.0kb downstream 2.0kb downstream 5116 true Chr11: 4956846-4961961 Glycine max
Glyma.11G065900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4956846-4958845 Glycine max
Glyma.11G065900 5.0kb upstream 5.0kb upstream 8116 true Chr11: 4958846-4966961 Glycine max
Glyma.11G065900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4961962-4966961 Glycine max
Glyma.11G065900 5.0kb downstream 5.0kb downstream 8116 true Chr11: 4953846-4961961 Glycine max
Glyma.11G065900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4953846-4958845 Glycine max
Glyma.11G065900 10.0kb upstream 10.0kb upstream 13116 true Chr11: 4958846-4971961 Glycine max
Glyma.11G065900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4961962-4971961 Glycine max
Glyma.11G065900 10.0kb downstream 10.0kb downstream 13116 true Chr11: 4948846-4961961 Glycine max
Glyma.11G065900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4948846-4958845 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314824 5265 Fabidae View MSA
124074928 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.87317 0.0 17.4608    
cufflinks 1.62538 0.0 8.1805    
cufflinks 0.786177 0.0 4.61886   Low
cufflinks 2.833 0.0 14.2207    
cufflinks 5.07267 0.0 21.16    
cufflinks 3.66859 0.0 14.3656    
cufflinks 2.51689 0.0 11.0281    
cufflinks 4.48184 0.0 19.2474    
cufflinks 5.66531 0.0 22.6518   High
cufflinks 0.438        
cufflinks 0.427        
cufflinks 0.243        
cufflinks 1.063       High
cufflinks 1.46       High
cufflinks 0.528        
cufflinks 0.141       Low
cufflinks 0.352        
cufflinks 0.148       Low
cufflinks 0.404        
cufflinks 0.279        
cufflinks 0.433        
cufflinks 0.256        
cufflinks 0.22        
cufflinks 0.452        
cufflinks 0.165       Low
cufflinks 0.429        

0 Strain