Gene : Glyma.11G077000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11139:SF1 - TRANSFORMATION/TRANSCRIPTION DOMAIN-ASSOCIATED PROTEIN Genomic Order:  770
Name:  ? Glyma.11G077000 Secondary Identifier:  ? PAC:30529864
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G077000 0.5kb upstream 0.5kb upstream 32572 true Chr11: 5750701-5783272 Glycine max
Glyma.11G077000 0.5kb upstream 0.5kb upstream 500 false Chr11: 5750701-5751200 Glycine max
Glyma.11G077000 0.5kb downstream 0.5kb downstream 32572 true Chr11: 5751201-5783772 Glycine max
Glyma.11G077000 0.5kb downstream 0.5kb downstream 500 false Chr11: 5783273-5783772 Glycine max
Glyma.11G077000 1.0kb upstream 1.0kb upstream 33072 true Chr11: 5750201-5783272 Glycine max
Glyma.11G077000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5750201-5751200 Glycine max
Glyma.11G077000 1.0kb downstream 1.0kb downstream 33072 true Chr11: 5751201-5784272 Glycine max
Glyma.11G077000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5783273-5784272 Glycine max
Glyma.11G077000 2.0kb upstream 2.0kb upstream 34072 true Chr11: 5749201-5783272 Glycine max
Glyma.11G077000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5749201-5751200 Glycine max
Glyma.11G077000 2.0kb downstream 2.0kb downstream 34072 true Chr11: 5751201-5785272 Glycine max
Glyma.11G077000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5783273-5785272 Glycine max
Glyma.11G077000 5.0kb upstream 5.0kb upstream 37072 true Chr11: 5746201-5783272 Glycine max
Glyma.11G077000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5746201-5751200 Glycine max
Glyma.11G077000 5.0kb downstream 5.0kb downstream 37072 true Chr11: 5751201-5788272 Glycine max
Glyma.11G077000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5783273-5788272 Glycine max
Glyma.11G077000 10.0kb upstream 10.0kb upstream 42072 true Chr11: 5741201-5783272 Glycine max
Glyma.11G077000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5741201-5751200 Glycine max
Glyma.11G077000 10.0kb downstream 10.0kb downstream 42072 true Chr11: 5751201-5793272 Glycine max
Glyma.11G077000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5783273-5793272 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027431 5273 Angiosperm View MSA
122300725 5265 Fabidae View MSA
124067016 5270 Rosid View MSA
123737923 5271 Pentapetalae View MSA
122791578 5272 Eudicot View MSA
121344769 5274 Embryophyte View MSA
123424018 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.19319 0.0 23.6585    
cufflinks 6.63554 0.0 18.7027    
cufflinks 10.36 0.0 31.1013   High
cufflinks 8.40886 0.0 24.4219    
cufflinks 4.18817 0.0 11.3381   Low
cufflinks 2.76766 0.0 7.3901   Low
cufflinks 8.47604 0.0 24.5525    
cufflinks 5.68952 0.0 15.7971    
cufflinks 6.10458 0.0 17.0567    
cufflinks 2.213        
cufflinks 1.58       Low
cufflinks 4.251        
cufflinks 1.717       Low
cufflinks 1.582       Low
cufflinks 2.452        
cufflinks 4.303        
cufflinks 2.051        
cufflinks 4.74       High
cufflinks 4.748       High
cufflinks 4.739       High
cufflinks 1.87        
cufflinks 5.2       High
cufflinks 3.544        
cufflinks 1.949        
cufflinks 4.586       High
cufflinks 2.405        

0 Strain