Gene : Glyma.11G047300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR21717:SF27 - TELOMERE REPEAT-BINDING FACTOR 2-RELATED Genomic Order:  473
Name:  ? Glyma.11G047300 Secondary Identifier:  ? PAC:30531184
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G047300 0.5kb upstream 0.5kb upstream 5019 true Chr11: 3535874-3540892 Glycine max
Glyma.11G047300 0.5kb upstream 0.5kb upstream 500 false Chr11: 3535874-3536373 Glycine max
Glyma.11G047300 0.5kb downstream 0.5kb downstream 5019 true Chr11: 3536374-3541392 Glycine max
Glyma.11G047300 0.5kb downstream 0.5kb downstream 500 false Chr11: 3540893-3541392 Glycine max
Glyma.11G047300 1.0kb upstream 1.0kb upstream 5519 true Chr11: 3535374-3540892 Glycine max
Glyma.11G047300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3535374-3536373 Glycine max
Glyma.11G047300 1.0kb downstream 1.0kb downstream 5519 true Chr11: 3536374-3541892 Glycine max
Glyma.11G047300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3540893-3541892 Glycine max
Glyma.11G047300 2.0kb upstream 2.0kb upstream 6519 true Chr11: 3534374-3540892 Glycine max
Glyma.11G047300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3534374-3536373 Glycine max
Glyma.11G047300 2.0kb downstream 2.0kb downstream 6519 true Chr11: 3536374-3542892 Glycine max
Glyma.11G047300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3540893-3542892 Glycine max
Glyma.11G047300 5.0kb upstream 5.0kb upstream 9519 true Chr11: 3531374-3540892 Glycine max
Glyma.11G047300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3531374-3536373 Glycine max
Glyma.11G047300 5.0kb downstream 5.0kb downstream 9519 true Chr11: 3536374-3545892 Glycine max
Glyma.11G047300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3540893-3545892 Glycine max
Glyma.11G047300 10.0kb upstream 10.0kb upstream 14519 true Chr11: 3526374-3540892 Glycine max
Glyma.11G047300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3526374-3536373 Glycine max
Glyma.11G047300 10.0kb downstream 10.0kb downstream 14519 true Chr11: 3536374-3550892 Glycine max
Glyma.11G047300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3540893-3550892 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309992 5265 Fabidae View MSA
124073708 5270 Rosid View MSA
123739242 5271 Pentapetalae View MSA
122787405 5272 Eudicot View MSA
122045775 5273 Angiosperm View MSA
121350383 5274 Embryophyte View MSA
123425799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.15427 0.0 19.9606    
cufflinks 5.09042 0.0 22.5643    
cufflinks 3.82884 0.0 13.9377    
cufflinks 8.09904 0.0 28.9829   High
cufflinks 3.73749 0.0 16.1577    
cufflinks 4.39766 0.0 18.1861    
cufflinks 6.46128 0.0 27.713    
cufflinks 7.04942 0.0 31.9247   High
cufflinks 3.72486 0.0 14.0792    
cufflinks 0.686       High
cufflinks 0.272       Low
cufflinks 0.661        
cufflinks 0.64        
cufflinks 0.54        
cufflinks 0.343       Low
cufflinks 0.5        
cufflinks 0.409        
cufflinks 0.829       High
cufflinks 0.788       High
cufflinks 0.492        
cufflinks 0.319       Low
cufflinks 0.53        
cufflinks 0.557        
cufflinks 0.405        
cufflinks 0.501        
cufflinks 0.402        

0 Strain