Gene : Glyma.11G040000 G. max Wm82.a2.v1
Genomic Order:  400 Name:  ? Glyma.11G040000
Secondary Identifier:  ? PAC:30529836
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G040000 0.5kb upstream 0.5kb upstream 15986 true Chr11: 2924678-2940663 Glycine max
Glyma.11G040000 0.5kb upstream 0.5kb upstream 500 false Chr11: 2940164-2940663 Glycine max
Glyma.11G040000 0.5kb downstream 0.5kb downstream 15986 true Chr11: 2924178-2940163 Glycine max
Glyma.11G040000 0.5kb downstream 0.5kb downstream 500 false Chr11: 2924178-2924677 Glycine max
Glyma.11G040000 1.0kb upstream 1.0kb upstream 16486 true Chr11: 2924678-2941163 Glycine max
Glyma.11G040000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2940164-2941163 Glycine max
Glyma.11G040000 1.0kb downstream 1.0kb downstream 16486 true Chr11: 2923678-2940163 Glycine max
Glyma.11G040000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2923678-2924677 Glycine max
Glyma.11G040000 2.0kb upstream 2.0kb upstream 17486 true Chr11: 2924678-2942163 Glycine max
Glyma.11G040000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2940164-2942163 Glycine max
Glyma.11G040000 2.0kb downstream 2.0kb downstream 17486 true Chr11: 2922678-2940163 Glycine max
Glyma.11G040000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2922678-2924677 Glycine max
Glyma.11G040000 5.0kb upstream 5.0kb upstream 20486 true Chr11: 2924678-2945163 Glycine max
Glyma.11G040000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2940164-2945163 Glycine max
Glyma.11G040000 5.0kb downstream 5.0kb downstream 20486 true Chr11: 2919678-2940163 Glycine max
Glyma.11G040000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2919678-2924677 Glycine max
Glyma.11G040000 10.0kb upstream 10.0kb upstream 25486 true Chr11: 2924678-2950163 Glycine max
Glyma.11G040000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2940164-2950163 Glycine max
Glyma.11G040000 10.0kb downstream 10.0kb downstream 25486 true Chr11: 2914678-2940163 Glycine max
Glyma.11G040000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2914678-2924677 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309198 5265 Fabidae View MSA
124073287 5270 Rosid View MSA
123741641 5271 Pentapetalae View MSA
122787770 5272 Eudicot View MSA
122043442 5273 Angiosperm View MSA
121344544 5274 Embryophyte View MSA
123380062 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.34347 0.0 26.1212    
cufflinks 7.40414 0.0 41.2001    
cufflinks 7.24042 0.0 38.5716    
cufflinks 9.20886 0.0 51.7846    
cufflinks 6.20374 0.0 30.7058    
cufflinks 4.37916 0.0 19.9498   Low
cufflinks 7.25154 0.0 36.5952    
cufflinks 12.0835 0.0 58.8145   High
cufflinks 6.1227 0.0 33.8878    
cufflinks 0.296       High
cufflinks 0.044     Low Low
cufflinks 0.282        
cufflinks 0.155        
cufflinks 0.131        
cufflinks 0.09        
cufflinks 0.2        
cufflinks 0.167        
cufflinks 0.27        
cufflinks 0.331       High
cufflinks 0.186        
cufflinks 0.072       Low
cufflinks 0.224        
cufflinks 0.168        
cufflinks 0.04     Low Low
cufflinks 0.194        
cufflinks 0.142        

0 Strain