Gene : Glyma.11G050900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13832:SF362 - PROTEIN PHOSPHATASE 2C 63-RELATED Genomic Order:  509
Name:  ? Glyma.11G050900 Secondary Identifier:  ? PAC:30531231
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G050900 0.5kb upstream 0.5kb upstream 4617 true Chr11: 3800470-3805086 Glycine max
Glyma.11G050900 0.5kb upstream 0.5kb upstream 500 false Chr11: 3800470-3800969 Glycine max
Glyma.11G050900 0.5kb downstream 0.5kb downstream 4617 true Chr11: 3800970-3805586 Glycine max
Glyma.11G050900 0.5kb downstream 0.5kb downstream 500 false Chr11: 3805087-3805586 Glycine max
Glyma.11G050900 1.0kb upstream 1.0kb upstream 5117 true Chr11: 3799970-3805086 Glycine max
Glyma.11G050900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3799970-3800969 Glycine max
Glyma.11G050900 1.0kb downstream 1.0kb downstream 5117 true Chr11: 3800970-3806086 Glycine max
Glyma.11G050900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3805087-3806086 Glycine max
Glyma.11G050900 2.0kb upstream 2.0kb upstream 6117 true Chr11: 3798970-3805086 Glycine max
Glyma.11G050900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3798970-3800969 Glycine max
Glyma.11G050900 2.0kb downstream 2.0kb downstream 6117 true Chr11: 3800970-3807086 Glycine max
Glyma.11G050900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3805087-3807086 Glycine max
Glyma.11G050900 5.0kb upstream 5.0kb upstream 9117 true Chr11: 3795970-3805086 Glycine max
Glyma.11G050900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3795970-3800969 Glycine max
Glyma.11G050900 5.0kb downstream 5.0kb downstream 9117 true Chr11: 3800970-3810086 Glycine max
Glyma.11G050900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3805087-3810086 Glycine max
Glyma.11G050900 10.0kb upstream 10.0kb upstream 14117 true Chr11: 3790970-3805086 Glycine max
Glyma.11G050900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3790970-3800969 Glycine max
Glyma.11G050900 10.0kb downstream 10.0kb downstream 14117 true Chr11: 3800970-3815086 Glycine max
Glyma.11G050900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3805087-3815086 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029851 5273 Angiosperm View MSA
122309550 5265 Fabidae View MSA
124072609 5270 Rosid View MSA
123747225 5271 Pentapetalae View MSA
122790095 5272 Eudicot View MSA
121299118 5274 Embryophyte View MSA
123337035 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2754 0.0 50.3609   High
cufflinks 0.677941 0.0 4.09841   Low
cufflinks 4.82278 0.0 23.9103    
cufflinks 2.9448 0.0 17.888    
cufflinks 2.92207 0.0 17.3694    
cufflinks 4.58698 0.0 22.8422    
cufflinks 0.355471 0.0 2.39261   Low
cufflinks 12.9052 0.0 49.6435   High
cufflinks 2.48459 0.0 14.1899    
cufflinks 2.327       High
cufflinks 1.726        
cufflinks 1.435        
cufflinks 0.603        
cufflinks 0.243       Low
cufflinks 0.288       Low
cufflinks 0.569        
cufflinks 8.857     High High
cufflinks 0.662        
cufflinks 0.168       Low
cufflinks 0.321        
cufflinks 1.293        
cufflinks 0.657        
cufflinks 0.542        
cufflinks 1.288        
cufflinks 0.374        
cufflinks 2.745       High

0 Strain