Gene : Glyma.10G230000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22904:SF344 - PROTEIN SGT1 HOMOLOG A-RELATED Genomic Order:  2300
Name:  ? Glyma.10G230000 Secondary Identifier:  ? PAC:30476090
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G230000 0.5kb upstream 0.5kb upstream 4577 true Chr10: 46013366-46017942 Glycine max
Glyma.10G230000 0.5kb upstream 0.5kb upstream 500 false Chr10: 46017443-46017942 Glycine max
Glyma.10G230000 0.5kb downstream 0.5kb downstream 4577 true Chr10: 46012866-46017442 Glycine max
Glyma.10G230000 0.5kb downstream 0.5kb downstream 500 false Chr10: 46012866-46013365 Glycine max
Glyma.10G230000 1.0kb upstream 1.0kb upstream 5077 true Chr10: 46013366-46018442 Glycine max
Glyma.10G230000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46017443-46018442 Glycine max
Glyma.10G230000 1.0kb downstream 1.0kb downstream 5077 true Chr10: 46012366-46017442 Glycine max
Glyma.10G230000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46012366-46013365 Glycine max
Glyma.10G230000 2.0kb upstream 2.0kb upstream 6077 true Chr10: 46013366-46019442 Glycine max
Glyma.10G230000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46017443-46019442 Glycine max
Glyma.10G230000 2.0kb downstream 2.0kb downstream 6077 true Chr10: 46011366-46017442 Glycine max
Glyma.10G230000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46011366-46013365 Glycine max
Glyma.10G230000 5.0kb upstream 5.0kb upstream 9077 true Chr10: 46013366-46022442 Glycine max
Glyma.10G230000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46017443-46022442 Glycine max
Glyma.10G230000 5.0kb downstream 5.0kb downstream 9077 true Chr10: 46008366-46017442 Glycine max
Glyma.10G230000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46008366-46013365 Glycine max
Glyma.10G230000 10.0kb upstream 10.0kb upstream 14077 true Chr10: 46013366-46027442 Glycine max
Glyma.10G230000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46017443-46027442 Glycine max
Glyma.10G230000 10.0kb downstream 10.0kb downstream 14077 true Chr10: 46003366-46017442 Glycine max
Glyma.10G230000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46003366-46013365 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029925 5273 Angiosperm View MSA
122241259 5265 Fabidae Singleton cluster - no MSA
124041894 5270 Rosid View MSA
123647120 5271 Pentapetalae View MSA
122681123 5272 Eudicot View MSA
121299178 5274 Embryophyte View MSA
123337088 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.9667 0.0 92.5771 High High
cufflinks 5.56437 0.0 15.8603    
cufflinks 11.0106 0.0 29.6616    
cufflinks 6.84974 0.0 19.0835    
cufflinks 8.01914 0.0 22.1112    
cufflinks 7.68362 0.0 21.2406    
cufflinks 2.27939 0.0 7.37199   Low
cufflinks 5.8474 0.0 16.5549    
cufflinks 8.06725 0.0 22.186    
cufflinks 16.75     High  
cufflinks 17.0     High  
cufflinks 7.601     High  
cufflinks 8.6     High  
cufflinks 2.878       Low
cufflinks 2.728       Low
cufflinks 6.34        
cufflinks 28.443     High High
cufflinks 5.722        
cufflinks 4.978        
cufflinks 4.094        
cufflinks 9.072     High  
cufflinks 8.192     High  
cufflinks 8.879     High  
cufflinks 18.078     High High
cufflinks 4.57        
cufflinks 28.966     High High

0 Strain