Gene : Glyma.10G248800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11558//PTHR11558:SF30 - SPERMIDINE/SPERMINE SYNTHASE Genomic Order:  2488
Name:  ? Glyma.10G248800 Secondary Identifier:  ? PAC:30476738
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G248800 0.5kb upstream 0.5kb upstream 3645 true Chr10: 47701678-47705322 Glycine max
Glyma.10G248800 0.5kb upstream 0.5kb upstream 500 false Chr10: 47701678-47702177 Glycine max
Glyma.10G248800 0.5kb downstream 0.5kb downstream 3645 true Chr10: 47702178-47705822 Glycine max
Glyma.10G248800 0.5kb downstream 0.5kb downstream 500 false Chr10: 47705323-47705822 Glycine max
Glyma.10G248800 1.0kb upstream 1.0kb upstream 4145 true Chr10: 47701178-47705322 Glycine max
Glyma.10G248800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 47701178-47702177 Glycine max
Glyma.10G248800 1.0kb downstream 1.0kb downstream 4145 true Chr10: 47702178-47706322 Glycine max
Glyma.10G248800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 47705323-47706322 Glycine max
Glyma.10G248800 2.0kb upstream 2.0kb upstream 5145 true Chr10: 47700178-47705322 Glycine max
Glyma.10G248800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 47700178-47702177 Glycine max
Glyma.10G248800 2.0kb downstream 2.0kb downstream 5145 true Chr10: 47702178-47707322 Glycine max
Glyma.10G248800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 47705323-47707322 Glycine max
Glyma.10G248800 5.0kb upstream 5.0kb upstream 8145 true Chr10: 47697178-47705322 Glycine max
Glyma.10G248800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 47697178-47702177 Glycine max
Glyma.10G248800 5.0kb downstream 5.0kb downstream 8145 true Chr10: 47702178-47710322 Glycine max
Glyma.10G248800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 47705323-47710322 Glycine max
Glyma.10G248800 10.0kb upstream 10.0kb upstream 13145 true Chr10: 47692178-47705322 Glycine max
Glyma.10G248800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 47692178-47702177 Glycine max
Glyma.10G248800 10.0kb downstream 10.0kb downstream 13145 true Chr10: 47702178-47715322 Glycine max
Glyma.10G248800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 47705323-47715322 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312400 5265 Fabidae View MSA
124069905 5270 Rosid View MSA
123748388 5271 Pentapetalae View MSA
122794179 5272 Eudicot View MSA
122050339 5273 Angiosperm View MSA
121346949 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.03078 0.0 3.67144   Low
cufflinks 12.9106 0.0 34.7987    
cufflinks 1.76044 0.0 5.94518    
cufflinks 1.09496 0.0 3.87725   Low
cufflinks 11.7199 0.0 31.7823    
cufflinks 4.82142 0.0 14.2701    
cufflinks 4.51396 0.0 13.5086    
cufflinks 29.279 0.0 78.7145 High High
cufflinks 8.14417 0.0 22.6504    
cufflinks 9.664     High  
cufflinks 1.358        
cufflinks 2.851        
cufflinks 10.811     High  
cufflinks 10.189     High  
cufflinks 0.074       Low
cufflinks 7.026        
cufflinks 3.045        
cufflinks 3.147        
cufflinks 7.522     High  
cufflinks 7.756     High  
cufflinks 2.116        
cufflinks 8.323     High  
cufflinks 7.337        
cufflinks 1.454        
cufflinks 8.317     High  
cufflinks 2.376        

0 Strain