Gene : Glyma.10G208100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11679:SF1 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 33B Genomic Order:  2081
Name:  ? Glyma.10G208100 Secondary Identifier:  ? PAC:30476663
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G208100 0.5kb upstream 0.5kb upstream 11011 true Chr10: 43978676-43989686 Glycine max
Glyma.10G208100 0.5kb upstream 0.5kb upstream 500 false Chr10: 43989187-43989686 Glycine max
Glyma.10G208100 0.5kb downstream 0.5kb downstream 11011 true Chr10: 43978176-43989186 Glycine max
Glyma.10G208100 0.5kb downstream 0.5kb downstream 500 false Chr10: 43978176-43978675 Glycine max
Glyma.10G208100 1.0kb upstream 1.0kb upstream 11511 true Chr10: 43978676-43990186 Glycine max
Glyma.10G208100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43989187-43990186 Glycine max
Glyma.10G208100 1.0kb downstream 1.0kb downstream 11511 true Chr10: 43977676-43989186 Glycine max
Glyma.10G208100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43977676-43978675 Glycine max
Glyma.10G208100 2.0kb upstream 2.0kb upstream 12511 true Chr10: 43978676-43991186 Glycine max
Glyma.10G208100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43989187-43991186 Glycine max
Glyma.10G208100 2.0kb downstream 2.0kb downstream 12511 true Chr10: 43976676-43989186 Glycine max
Glyma.10G208100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43976676-43978675 Glycine max
Glyma.10G208100 5.0kb upstream 5.0kb upstream 15511 true Chr10: 43978676-43994186 Glycine max
Glyma.10G208100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43989187-43994186 Glycine max
Glyma.10G208100 5.0kb downstream 5.0kb downstream 15511 true Chr10: 43973676-43989186 Glycine max
Glyma.10G208100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43973676-43978675 Glycine max
Glyma.10G208100 10.0kb upstream 10.0kb upstream 20511 true Chr10: 43978676-43999186 Glycine max
Glyma.10G208100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43989187-43999186 Glycine max
Glyma.10G208100 10.0kb downstream 10.0kb downstream 20511 true Chr10: 43968676-43989186 Glycine max
Glyma.10G208100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43968676-43978675 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303848 5265 Fabidae View MSA
124060687 5270 Rosid View MSA
123752056 5271 Pentapetalae View MSA
122787734 5272 Eudicot View MSA
122044199 5273 Angiosperm View MSA
121343889 5274 Embryophyte View MSA
123428072 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.6796 0.0 54.2451   Low
cufflinks 29.6983 0.0 111.756 High  
cufflinks 23.8771 0.0 87.8492 High  
cufflinks 30.6459 0.0 115.882 High  
cufflinks 24.2665 0.0 87.9787 High  
cufflinks 30.9027 0.0 116.049 High  
cufflinks 33.0846 0.0 125.732 High High
cufflinks 28.193 0.0 105.602 High  
cufflinks 23.7065 0.0 86.1354 High  
cufflinks 2.963       High
cufflinks 0.862       Low
cufflinks 2.172        
cufflinks 3.029       High
cufflinks 3.202       High
cufflinks 0.857       Low
cufflinks 1.71        
cufflinks 1.327        
cufflinks 3.206       High
cufflinks 2.592        
cufflinks 1.679        
cufflinks 1.216        
cufflinks 1.752        
cufflinks 1.759        
cufflinks 1.035       Low
cufflinks 1.712        
cufflinks 1.422        

0 Strain