Gene : Glyma.10G207800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21600 - RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B Genomic Order:  2078
Name:  ? Glyma.10G207800 Secondary Identifier:  ? PAC:30475153
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G207800 0.5kb upstream 0.5kb upstream 9219 true Chr10: 43943672-43952890 Glycine max
Glyma.10G207800 0.5kb upstream 0.5kb upstream 500 false Chr10: 43943672-43944171 Glycine max
Glyma.10G207800 0.5kb downstream 0.5kb downstream 9219 true Chr10: 43944172-43953390 Glycine max
Glyma.10G207800 0.5kb downstream 0.5kb downstream 500 false Chr10: 43952891-43953390 Glycine max
Glyma.10G207800 1.0kb upstream 1.0kb upstream 9719 true Chr10: 43943172-43952890 Glycine max
Glyma.10G207800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43943172-43944171 Glycine max
Glyma.10G207800 1.0kb downstream 1.0kb downstream 9719 true Chr10: 43944172-43953890 Glycine max
Glyma.10G207800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43952891-43953890 Glycine max
Glyma.10G207800 2.0kb upstream 2.0kb upstream 10719 true Chr10: 43942172-43952890 Glycine max
Glyma.10G207800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43942172-43944171 Glycine max
Glyma.10G207800 2.0kb downstream 2.0kb downstream 10719 true Chr10: 43944172-43954890 Glycine max
Glyma.10G207800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43952891-43954890 Glycine max
Glyma.10G207800 5.0kb upstream 5.0kb upstream 13719 true Chr10: 43939172-43952890 Glycine max
Glyma.10G207800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43939172-43944171 Glycine max
Glyma.10G207800 5.0kb downstream 5.0kb downstream 13719 true Chr10: 43944172-43957890 Glycine max
Glyma.10G207800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43952891-43957890 Glycine max
Glyma.10G207800 10.0kb upstream 10.0kb upstream 18719 true Chr10: 43934172-43952890 Glycine max
Glyma.10G207800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43934172-43944171 Glycine max
Glyma.10G207800 10.0kb downstream 10.0kb downstream 18719 true Chr10: 43944172-43962890 Glycine max
Glyma.10G207800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43952891-43962890 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308572 5265 Fabidae View MSA
124064445 5270 Rosid View MSA
123747131 5271 Pentapetalae View MSA
122791737 5272 Eudicot View MSA
122046867 5273 Angiosperm View MSA
121350601 5274 Embryophyte View MSA
123427017 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.4319 0.0 75.9473   High
cufflinks 7.56563 0.0 30.6528    
cufflinks 7.94816 0.0 30.9181    
cufflinks 8.06161 0.0 31.9878    
cufflinks 5.65158 0.0 23.385    
cufflinks 3.9017 0.0 16.2383   Low
cufflinks 4.9538 0.0 17.7492    
cufflinks 6.25933 0.0 25.3273    
cufflinks 4.24276 0.0 19.9809    
cufflinks 0.344        
cufflinks 0.132       Low
cufflinks 0.697        
cufflinks 0.328        
cufflinks 0.363        
cufflinks 0.186        
cufflinks 1.211       High
cufflinks 0.151       Low
cufflinks 0.676        
cufflinks 0.714        
cufflinks 1.168       High
cufflinks 0.166       Low
cufflinks 1.275       High
cufflinks 1.337       High
cufflinks 0.191        
cufflinks 1.232       High
cufflinks 0.161       Low

0 Strain