Gene : Glyma.10G152900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24031//PTHR24031:SF260 - RNA HELICASE Genomic Order:  1529
Name:  ? Glyma.10G152900 Secondary Identifier:  ? PAC:30477888
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G152900 0.5kb upstream 0.5kb upstream 7848 true Chr10: 38752552-38760399 Glycine max
Glyma.10G152900 0.5kb upstream 0.5kb upstream 500 false Chr10: 38752552-38753051 Glycine max
Glyma.10G152900 0.5kb downstream 0.5kb downstream 7848 true Chr10: 38753052-38760899 Glycine max
Glyma.10G152900 0.5kb downstream 0.5kb downstream 500 false Chr10: 38760400-38760899 Glycine max
Glyma.10G152900 1.0kb upstream 1.0kb upstream 8348 true Chr10: 38752052-38760399 Glycine max
Glyma.10G152900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38752052-38753051 Glycine max
Glyma.10G152900 1.0kb downstream 1.0kb downstream 8348 true Chr10: 38753052-38761399 Glycine max
Glyma.10G152900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38760400-38761399 Glycine max
Glyma.10G152900 2.0kb upstream 2.0kb upstream 9348 true Chr10: 38751052-38760399 Glycine max
Glyma.10G152900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38751052-38753051 Glycine max
Glyma.10G152900 2.0kb downstream 2.0kb downstream 9348 true Chr10: 38753052-38762399 Glycine max
Glyma.10G152900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38760400-38762399 Glycine max
Glyma.10G152900 5.0kb upstream 5.0kb upstream 12348 true Chr10: 38748052-38760399 Glycine max
Glyma.10G152900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38748052-38753051 Glycine max
Glyma.10G152900 5.0kb downstream 5.0kb downstream 12348 true Chr10: 38753052-38765399 Glycine max
Glyma.10G152900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38760400-38765399 Glycine max
Glyma.10G152900 10.0kb upstream 10.0kb upstream 17348 true Chr10: 38743052-38760399 Glycine max
Glyma.10G152900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38743052-38753051 Glycine max
Glyma.10G152900 10.0kb downstream 10.0kb downstream 17348 true Chr10: 38753052-38770399 Glycine max
Glyma.10G152900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38760400-38770399 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041039 5273 Angiosperm View MSA
122304520 5265 Fabidae View MSA
124050268 5270 Rosid View MSA
123750448 5271 Pentapetalae View MSA
122793335 5272 Eudicot View MSA
121343805 5274 Embryophyte View MSA
123424907 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.37261 0.0 25.166    
cufflinks 10.254 0.0 27.4506    
cufflinks 6.98566 0.0 19.0222   Low
cufflinks 7.039 0.0 19.1523   Low
cufflinks 12.8128 0.0 34.185   High
cufflinks 7.06028 0.0 19.2166   Low
cufflinks 10.015 0.0 26.8404    
cufflinks 8.53823 0.0 23.0007    
cufflinks 8.70281 0.0 23.4244    
cufflinks 2.102        
cufflinks 1.309       Low
cufflinks 3.089        
cufflinks 4.611       High
cufflinks 6.542       High
cufflinks 1.88        
cufflinks 2.066        
cufflinks 1.808        
cufflinks 2.627        
cufflinks 4.045       High
cufflinks 1.681        
cufflinks 2.431        
cufflinks 1.93        
cufflinks 3.011        
cufflinks 1.951        
cufflinks 1.776        
cufflinks 2.251        

0 Strain