Gene : Glyma.10G160300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10496 - 40S RIBOSOMAL PROTEIN S24 Genomic Order:  1603
Name:  ? Glyma.10G160300 Secondary Identifier:  ? PAC:30476768
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G160300 0.5kb upstream 0.5kb upstream 2667 true Chr10: 39440769-39443435 Glycine max
Glyma.10G160300 0.5kb upstream 0.5kb upstream 500 false Chr10: 39442936-39443435 Glycine max
Glyma.10G160300 0.5kb downstream 0.5kb downstream 2667 true Chr10: 39440269-39442935 Glycine max
Glyma.10G160300 0.5kb downstream 0.5kb downstream 500 false Chr10: 39440269-39440768 Glycine max
Glyma.10G160300 1.0kb upstream 1.0kb upstream 3167 true Chr10: 39440769-39443935 Glycine max
Glyma.10G160300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39442936-39443935 Glycine max
Glyma.10G160300 1.0kb downstream 1.0kb downstream 3167 true Chr10: 39439769-39442935 Glycine max
Glyma.10G160300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39439769-39440768 Glycine max
Glyma.10G160300 2.0kb upstream 2.0kb upstream 4167 true Chr10: 39440769-39444935 Glycine max
Glyma.10G160300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39442936-39444935 Glycine max
Glyma.10G160300 2.0kb downstream 2.0kb downstream 4167 true Chr10: 39438769-39442935 Glycine max
Glyma.10G160300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39438769-39440768 Glycine max
Glyma.10G160300 5.0kb upstream 5.0kb upstream 7167 true Chr10: 39440769-39447935 Glycine max
Glyma.10G160300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39442936-39447935 Glycine max
Glyma.10G160300 5.0kb downstream 5.0kb downstream 7167 true Chr10: 39435769-39442935 Glycine max
Glyma.10G160300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39435769-39440768 Glycine max
Glyma.10G160300 10.0kb upstream 10.0kb upstream 12167 true Chr10: 39440769-39452935 Glycine max
Glyma.10G160300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39442936-39452935 Glycine max
Glyma.10G160300 10.0kb downstream 10.0kb downstream 12167 true Chr10: 39430769-39442935 Glycine max
Glyma.10G160300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39430769-39440768 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122242121 5265 Fabidae Singleton cluster - no MSA
124061829 5270 Rosid View MSA
123751214 5271 Pentapetalae View MSA
122791652 5272 Eudicot View MSA
122050002 5273 Angiosperm View MSA
121343798 5274 Embryophyte View MSA
123428158 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 77.2028 0.0 279.207 High  
cufflinks 158.082 0.0 690.756 High  
cufflinks 51.4153 0.0 178.136 High Low
cufflinks 94.4136 0.0 356.473 High  
cufflinks 225.309 0.0 955.854 High  
cufflinks 214.2 0.0 894.492 High  
cufflinks 383.943 0.0 2094.28 High High
cufflinks 96.667 0.0 369.06 High  
cufflinks 157.918 0.0 691.43 High  
cufflinks 22.521     High  
cufflinks 6.839     High Low
cufflinks 19.348     High  
cufflinks 72.509     High High
cufflinks 124.57     High High
cufflinks 5.389     High Low
cufflinks 20.625     High  
cufflinks 14.204     High  
cufflinks 21.042     High  
cufflinks 30.356     High  
cufflinks 14.646     High  
cufflinks 11.125     High  
cufflinks 15.131     High  
cufflinks 21.865     High  
cufflinks 7.492     High Low
cufflinks 21.278     High  
cufflinks 15.158     High  

0 Strain