Gene : Glyma.10G125000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31683:SF20 - PECTATE LYASE 1-RELATED Genomic Order:  1250
Name:  ? Glyma.10G125000 Secondary Identifier:  ? PAC:30476930
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G125000 0.5kb upstream 0.5kb upstream 6230 true Chr10: 32668781-32675010 Glycine max
Glyma.10G125000 0.5kb upstream 0.5kb upstream 500 false Chr10: 32668781-32669280 Glycine max
Glyma.10G125000 0.5kb downstream 0.5kb downstream 6230 true Chr10: 32669281-32675510 Glycine max
Glyma.10G125000 0.5kb downstream 0.5kb downstream 500 false Chr10: 32675011-32675510 Glycine max
Glyma.10G125000 1.0kb upstream 1.0kb upstream 6730 true Chr10: 32668281-32675010 Glycine max
Glyma.10G125000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 32668281-32669280 Glycine max
Glyma.10G125000 1.0kb downstream 1.0kb downstream 6730 true Chr10: 32669281-32676010 Glycine max
Glyma.10G125000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 32675011-32676010 Glycine max
Glyma.10G125000 2.0kb upstream 2.0kb upstream 7730 true Chr10: 32667281-32675010 Glycine max
Glyma.10G125000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 32667281-32669280 Glycine max
Glyma.10G125000 2.0kb downstream 2.0kb downstream 7730 true Chr10: 32669281-32677010 Glycine max
Glyma.10G125000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 32675011-32677010 Glycine max
Glyma.10G125000 5.0kb upstream 5.0kb upstream 10730 true Chr10: 32664281-32675010 Glycine max
Glyma.10G125000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 32664281-32669280 Glycine max
Glyma.10G125000 5.0kb downstream 5.0kb downstream 10730 true Chr10: 32669281-32680010 Glycine max
Glyma.10G125000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 32675011-32680010 Glycine max
Glyma.10G125000 10.0kb upstream 10.0kb upstream 15730 true Chr10: 32659281-32675010 Glycine max
Glyma.10G125000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 32659281-32669280 Glycine max
Glyma.10G125000 10.0kb downstream 10.0kb downstream 15730 true Chr10: 32669281-32685010 Glycine max
Glyma.10G125000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 32675011-32685010 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305169 5265 Fabidae View MSA
124066652 5270 Rosid View MSA
123747644 5271 Pentapetalae View MSA
122791976 5272 Eudicot View MSA
122048067 5273 Angiosperm View MSA
121348568 5274 Embryophyte View MSA
123380918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.89099 0.0 8.7828   Low
cufflinks 26.927 0.0 73.1488 High  
cufflinks 11.118 0.0 29.782    
cufflinks 65.3186 0.0 196.372 High  
cufflinks 29.3702 0.0 80.3412 High  
cufflinks 13.4635 0.0 35.9349    
cufflinks 14.9143 0.0 39.7896    
cufflinks 189.097 0.0 720.039 High High
cufflinks 25.288 0.0 68.4986 High  
cufflinks 46.636     High High
cufflinks 0.173       Low
cufflinks 5.354        
cufflinks 5.536        
cufflinks 8.858     High  
cufflinks 0.123       Low
cufflinks 9.896     High  
cufflinks 4.85        
cufflinks 23.309     High  
cufflinks 11.837     High  
cufflinks 10.109     High  
cufflinks 0.623        
cufflinks 10.188     High  
cufflinks 14.905     High  
cufflinks 0.136       Low
cufflinks 9.646     High  
cufflinks 1.387        

0 Strain