Gene : Glyma.10G104400 G. max Wm82.a2.v1
Defline:  (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  1044
Name:  ? Glyma.10G104400 Secondary Identifier:  ? PAC:30477495
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G104400 0.5kb upstream 0.5kb upstream 1679 true Chr10: 22645633-22647311 Glycine max
Glyma.10G104400 0.5kb upstream 0.5kb upstream 500 false Chr10: 22646812-22647311 Glycine max
Glyma.10G104400 0.5kb downstream 0.5kb downstream 1679 true Chr10: 22645133-22646811 Glycine max
Glyma.10G104400 0.5kb downstream 0.5kb downstream 500 false Chr10: 22645133-22645632 Glycine max
Glyma.10G104400 1.0kb upstream 1.0kb upstream 2179 true Chr10: 22645633-22647811 Glycine max
Glyma.10G104400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 22646812-22647811 Glycine max
Glyma.10G104400 1.0kb downstream 1.0kb downstream 2179 true Chr10: 22644633-22646811 Glycine max
Glyma.10G104400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 22644633-22645632 Glycine max
Glyma.10G104400 2.0kb upstream 2.0kb upstream 3179 true Chr10: 22645633-22648811 Glycine max
Glyma.10G104400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 22646812-22648811 Glycine max
Glyma.10G104400 2.0kb downstream 2.0kb downstream 3179 true Chr10: 22643633-22646811 Glycine max
Glyma.10G104400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 22643633-22645632 Glycine max
Glyma.10G104400 5.0kb upstream 5.0kb upstream 6179 true Chr10: 22645633-22651811 Glycine max
Glyma.10G104400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 22646812-22651811 Glycine max
Glyma.10G104400 5.0kb downstream 5.0kb downstream 6179 true Chr10: 22640633-22646811 Glycine max
Glyma.10G104400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 22640633-22645632 Glycine max
Glyma.10G104400 10.0kb upstream 10.0kb upstream 11179 true Chr10: 22645633-22656811 Glycine max
Glyma.10G104400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 22646812-22656811 Glycine max
Glyma.10G104400 10.0kb downstream 10.0kb downstream 11179 true Chr10: 22635633-22646811 Glycine max
Glyma.10G104400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 22635633-22645632 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782035 5273 Angiosperm View MSA
122296546 5265 Fabidae View MSA
124040128 5270 Rosid View MSA
123751645 5271 Pentapetalae View MSA
122774115 5272 Eudicot View MSA
121053578 5274 Embryophyte View MSA
123093595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.302265 0.0 7.23779   High
cufflinks 0.125721 0.0 4.60206 Low  
cufflinks 0.0931136 0.0 3.91013 Low  
cufflinks 0.163121 0.0 6.30534 Low  
cufflinks 0.0846464 0.0 3.83284 Low  
cufflinks 0.0478554 0.0 4.46111 Low Low
cufflinks 0.0668537 0.0 3.49447 Low  
cufflinks 0.125585 0.0 5.20982 Low  
cufflinks 0.204214 0.0 6.51815 Low  
cufflinks 0.259        
cufflinks 0.082       Low
cufflinks 0.292        
cufflinks 0.284        
cufflinks 0.104        
cufflinks 0.217        
cufflinks 0.734       High
cufflinks 0.061     Low Low
cufflinks 0.228        
cufflinks 0.594        
cufflinks 0.732       High
cufflinks 0.119        
cufflinks 0.822       High
cufflinks 0.85       High
cufflinks 0.078       Low
cufflinks 0.765       High
cufflinks 0.13        

0 Strain