Gene : Glyma.10G031200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23430:SF76 - HISTONE H2A VARIANT 1-RELATED Genomic Order:  312
Name:  ? Glyma.10G031200 Secondary Identifier:  ? PAC:30477575
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G031200 0.5kb upstream 0.5kb upstream 2296 true Chr10: 2714898-2717193 Glycine max
Glyma.10G031200 0.5kb upstream 0.5kb upstream 500 false Chr10: 2716694-2717193 Glycine max
Glyma.10G031200 0.5kb downstream 0.5kb downstream 2296 true Chr10: 2714398-2716693 Glycine max
Glyma.10G031200 0.5kb downstream 0.5kb downstream 500 false Chr10: 2714398-2714897 Glycine max
Glyma.10G031200 1.0kb upstream 1.0kb upstream 2796 true Chr10: 2714898-2717693 Glycine max
Glyma.10G031200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2716694-2717693 Glycine max
Glyma.10G031200 1.0kb downstream 1.0kb downstream 2796 true Chr10: 2713898-2716693 Glycine max
Glyma.10G031200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2713898-2714897 Glycine max
Glyma.10G031200 2.0kb upstream 2.0kb upstream 3796 true Chr10: 2714898-2718693 Glycine max
Glyma.10G031200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2716694-2718693 Glycine max
Glyma.10G031200 2.0kb downstream 2.0kb downstream 3796 true Chr10: 2712898-2716693 Glycine max
Glyma.10G031200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2712898-2714897 Glycine max
Glyma.10G031200 5.0kb upstream 5.0kb upstream 6796 true Chr10: 2714898-2721693 Glycine max
Glyma.10G031200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2716694-2721693 Glycine max
Glyma.10G031200 5.0kb downstream 5.0kb downstream 6796 true Chr10: 2709898-2716693 Glycine max
Glyma.10G031200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2709898-2714897 Glycine max
Glyma.10G031200 10.0kb upstream 10.0kb upstream 11796 true Chr10: 2714898-2726693 Glycine max
Glyma.10G031200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2716694-2726693 Glycine max
Glyma.10G031200 10.0kb downstream 10.0kb downstream 11796 true Chr10: 2704898-2716693 Glycine max
Glyma.10G031200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2704898-2714897 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313188 5265 Fabidae View MSA
124071352 5270 Rosid View MSA
123749587 5271 Pentapetalae View MSA
122785634 5272 Eudicot View MSA
122050961 5273 Angiosperm View MSA
121349814 5274 Embryophyte View MSA
123424347 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.679136 0.0 3.34957   Low
cufflinks 115.721 0.0 466.887 High High
cufflinks 11.0244 0.0 44.4375    
cufflinks 22.1447 0.0 77.9489 High  
cufflinks 26.5765 0.0 92.3999 High  
cufflinks 37.2458 0.0 127.264 High  
cufflinks 36.0669 0.0 123.241 High  
cufflinks 14.1706 0.0 54.8163    
cufflinks 34.0047 0.0 116.295 High  
cufflinks 8.146     High  
cufflinks 1.783       Low
cufflinks 7.517     High  
cufflinks 12.919     High  
cufflinks 13.941     High  
cufflinks 0.939       Low
cufflinks 24.614     High High
cufflinks 2.906        
cufflinks 4.318        
cufflinks 29.948     High High
cufflinks 14.736     High  
cufflinks 2.259        
cufflinks 20.397     High  
cufflinks 38.625     High High
cufflinks 1.302       Low
cufflinks 19.063     High  
cufflinks 2.695        

0 Strain