Gene : Glyma.10G048500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12802:SF52 - PROTEIN REVEILLE 4-RELATED Genomic Order:  485
Name:  ? Glyma.10G048500 Secondary Identifier:  ? PAC:30476182
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G048500 0.5kb upstream 0.5kb upstream 6285 true Chr10: 4362655-4368939 Glycine max
Glyma.10G048500 0.5kb upstream 0.5kb upstream 500 false Chr10: 4362655-4363154 Glycine max
Glyma.10G048500 0.5kb downstream 0.5kb downstream 6285 true Chr10: 4363155-4369439 Glycine max
Glyma.10G048500 0.5kb downstream 0.5kb downstream 500 false Chr10: 4368940-4369439 Glycine max
Glyma.10G048500 1.0kb upstream 1.0kb upstream 6785 true Chr10: 4362155-4368939 Glycine max
Glyma.10G048500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4362155-4363154 Glycine max
Glyma.10G048500 1.0kb downstream 1.0kb downstream 6785 true Chr10: 4363155-4369939 Glycine max
Glyma.10G048500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4368940-4369939 Glycine max
Glyma.10G048500 2.0kb upstream 2.0kb upstream 7785 true Chr10: 4361155-4368939 Glycine max
Glyma.10G048500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4361155-4363154 Glycine max
Glyma.10G048500 2.0kb downstream 2.0kb downstream 7785 true Chr10: 4363155-4370939 Glycine max
Glyma.10G048500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4368940-4370939 Glycine max
Glyma.10G048500 5.0kb upstream 5.0kb upstream 10785 true Chr10: 4358155-4368939 Glycine max
Glyma.10G048500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4358155-4363154 Glycine max
Glyma.10G048500 5.0kb downstream 5.0kb downstream 10785 true Chr10: 4363155-4373939 Glycine max
Glyma.10G048500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4368940-4373939 Glycine max
Glyma.10G048500 10.0kb upstream 10.0kb upstream 15785 true Chr10: 4353155-4368939 Glycine max
Glyma.10G048500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4353155-4363154 Glycine max
Glyma.10G048500 10.0kb downstream 10.0kb downstream 15785 true Chr10: 4363155-4378939 Glycine max
Glyma.10G048500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4368940-4378939 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308787 5265 Fabidae View MSA
124061297 5270 Rosid View MSA
123737493 5271 Pentapetalae View MSA
122797418 5272 Eudicot View MSA
122043190 5273 Angiosperm View MSA
121350765 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.7729 0.0 97.7782 High High
cufflinks 0.688286 0.0 5.07867    
cufflinks 7.83609 0.0 29.7401   High
cufflinks 1.52543 0.0 8.49031    
cufflinks 1.0293 0.0 7.77354    
cufflinks 2.63788 0.0 16.0149    
cufflinks 0.376385 0.0 2.9821   Low
cufflinks 0.474444 0.0 3.20887    
cufflinks 0.56447 0.0 4.38304    
cufflinks 0.223        
cufflinks 0.735        
cufflinks 0.69        
cufflinks 0.45        
cufflinks 0.121       Low
cufflinks 0.195       Low
cufflinks 2.121       High
cufflinks 0.095       Low
cufflinks 0.146       Low
cufflinks 0.562        
cufflinks 0.83        
cufflinks 1.335        
cufflinks 1.631       High
cufflinks 1.228        
cufflinks 1.1        
cufflinks 1.948       High
cufflinks 1.086        

0 Strain