Gene : Glyma.09G280700 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR13832:SF199 - PROTEIN PHOSPHATASE 2C 65-RELATED Genomic Order:  2807
Name:  ? Glyma.09G280700 Secondary Identifier:  ? PAC:30484521
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G280700 0.5kb upstream 0.5kb upstream 4475 true Chr09: 49577761-49582235 Glycine max
Glyma.09G280700 0.5kb upstream 0.5kb upstream 500 false Chr09: 49577761-49578260 Glycine max
Glyma.09G280700 0.5kb downstream 0.5kb downstream 4475 true Chr09: 49578261-49582735 Glycine max
Glyma.09G280700 0.5kb downstream 0.5kb downstream 500 false Chr09: 49582236-49582735 Glycine max
Glyma.09G280700 1.0kb upstream 1.0kb upstream 4975 true Chr09: 49577261-49582235 Glycine max
Glyma.09G280700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49577261-49578260 Glycine max
Glyma.09G280700 1.0kb downstream 1.0kb downstream 4975 true Chr09: 49578261-49583235 Glycine max
Glyma.09G280700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49582236-49583235 Glycine max
Glyma.09G280700 2.0kb upstream 2.0kb upstream 5975 true Chr09: 49576261-49582235 Glycine max
Glyma.09G280700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49576261-49578260 Glycine max
Glyma.09G280700 2.0kb downstream 2.0kb downstream 5975 true Chr09: 49578261-49584235 Glycine max
Glyma.09G280700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49582236-49584235 Glycine max
Glyma.09G280700 5.0kb upstream 5.0kb upstream 8975 true Chr09: 49573261-49582235 Glycine max
Glyma.09G280700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49573261-49578260 Glycine max
Glyma.09G280700 5.0kb downstream 5.0kb downstream 8975 true Chr09: 49578261-49587235 Glycine max
Glyma.09G280700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49582236-49587235 Glycine max
Glyma.09G280700 10.0kb upstream 10.0kb upstream 13975 true Chr09: 49568261-49582235 Glycine max
Glyma.09G280700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49568261-49578260 Glycine max
Glyma.09G280700 10.0kb downstream 10.0kb downstream 13975 true Chr09: 49578261-49592235 Glycine max
Glyma.09G280700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49582236-49592235 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306312 5265 Fabidae View MSA
124069818 5270 Rosid View MSA
123738484 5271 Pentapetalae View MSA
122794307 5272 Eudicot View MSA
122048670 5273 Angiosperm View MSA
121311066 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.69864 0.0 5.63474    
cufflinks 0.613091 0.0 2.22661   Low
cufflinks 8.55167 0.0 23.2535   High
cufflinks 0.683274 0.0 2.46329   Low
cufflinks 1.8558 0.0 6.09476    
cufflinks 1.00042 0.0 3.51116    
cufflinks 3.14969 0.0 9.58636    
cufflinks 1.85257 0.0 6.0602    
cufflinks 16.8921 0.0 45.0695   High
cufflinks 1.422        
cufflinks 4.553       High
cufflinks 1.784        
cufflinks 0.578        
cufflinks 0.227       Low
cufflinks 7.191     High High
cufflinks 0.624        
cufflinks 2.843        
cufflinks 0.866        
cufflinks 0.733        
cufflinks 0.301       Low
cufflinks 3.78       High
cufflinks 0.626        
cufflinks 0.531        
cufflinks 3.292        
cufflinks 0.348       Low
cufflinks 3.059        

0 Strain