Gene : Glyma.09G235400 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.5.1.48 - Cystathionine gamma-synthase / O-succinylhomoserine synthetase Genomic Order:  2354
Name:  ? Glyma.09G235400 Secondary Identifier:  ? PAC:30485590
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G235400 0.5kb upstream 0.5kb upstream 5495 true Chr09: 45800753-45806247 Glycine max
Glyma.09G235400 0.5kb upstream 0.5kb upstream 500 false Chr09: 45805748-45806247 Glycine max
Glyma.09G235400 0.5kb downstream 0.5kb downstream 5495 true Chr09: 45800253-45805747 Glycine max
Glyma.09G235400 0.5kb downstream 0.5kb downstream 500 false Chr09: 45800253-45800752 Glycine max
Glyma.09G235400 1.0kb upstream 1.0kb upstream 5995 true Chr09: 45800753-45806747 Glycine max
Glyma.09G235400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45805748-45806747 Glycine max
Glyma.09G235400 1.0kb downstream 1.0kb downstream 5995 true Chr09: 45799753-45805747 Glycine max
Glyma.09G235400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45799753-45800752 Glycine max
Glyma.09G235400 2.0kb upstream 2.0kb upstream 6995 true Chr09: 45800753-45807747 Glycine max
Glyma.09G235400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45805748-45807747 Glycine max
Glyma.09G235400 2.0kb downstream 2.0kb downstream 6995 true Chr09: 45798753-45805747 Glycine max
Glyma.09G235400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45798753-45800752 Glycine max
Glyma.09G235400 5.0kb upstream 5.0kb upstream 9995 true Chr09: 45800753-45810747 Glycine max
Glyma.09G235400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45805748-45810747 Glycine max
Glyma.09G235400 5.0kb downstream 5.0kb downstream 9995 true Chr09: 45795753-45805747 Glycine max
Glyma.09G235400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45795753-45800752 Glycine max
Glyma.09G235400 10.0kb upstream 10.0kb upstream 14995 true Chr09: 45800753-45815747 Glycine max
Glyma.09G235400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45805748-45815747 Glycine max
Glyma.09G235400 10.0kb downstream 10.0kb downstream 14995 true Chr09: 45790753-45805747 Glycine max
Glyma.09G235400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45790753-45800752 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041119 5273 Angiosperm View MSA
122299349 5265 Fabidae View MSA
124067979 5270 Rosid View MSA
123738660 5271 Pentapetalae View MSA
122791406 5272 Eudicot View MSA
121346184 5274 Embryophyte View MSA
123428336 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 106.887 0.0 557.758 High High
cufflinks 38.4722 0.0 156.521 High  
cufflinks 42.4221 0.0 157.639 High  
cufflinks 53.1174 0.0 236.687 High  
cufflinks 70.6557 0.0 314.715 High  
cufflinks 28.8033 0.0 112.016 High Low
cufflinks 33.1533 0.0 132.566 High Low
cufflinks 84.7874 0.0 396.639 High  
cufflinks 76.8062 0.0 347.891 High  
cufflinks 6.634        
cufflinks 6.42     High  
cufflinks 5.404        
cufflinks 6.44        
cufflinks 3.904       Low
cufflinks 10.459     High High
cufflinks 6.034        
cufflinks 17.48     High High
cufflinks 4.759        
cufflinks 4.247       Low
cufflinks 4.417       Low
cufflinks 8.368     High  
cufflinks 5.696        
cufflinks 7.931     High  
cufflinks 10.094     High High
cufflinks 4.806        
cufflinks 11.197     High High

0 Strain