Gene : Glyma.09G182900 G. max Wm82.a2.v1
Defline:  (1 of 63) PTHR23147:SF4 - SERINE/ARGININE-RICH SPLICING FACTOR 2 Genomic Order:  1829
Name:  ? Glyma.09G182900 Secondary Identifier:  ? PAC:30486139
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G182900 0.5kb upstream 0.5kb upstream 2748 true Chr09: 40805527-40808274 Glycine max
Glyma.09G182900 0.5kb upstream 0.5kb upstream 500 false Chr09: 40807775-40808274 Glycine max
Glyma.09G182900 0.5kb downstream 0.5kb downstream 2748 true Chr09: 40805027-40807774 Glycine max
Glyma.09G182900 0.5kb downstream 0.5kb downstream 500 false Chr09: 40805027-40805526 Glycine max
Glyma.09G182900 1.0kb upstream 1.0kb upstream 3248 true Chr09: 40805527-40808774 Glycine max
Glyma.09G182900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 40807775-40808774 Glycine max
Glyma.09G182900 1.0kb downstream 1.0kb downstream 3248 true Chr09: 40804527-40807774 Glycine max
Glyma.09G182900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 40804527-40805526 Glycine max
Glyma.09G182900 2.0kb upstream 2.0kb upstream 4248 true Chr09: 40805527-40809774 Glycine max
Glyma.09G182900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 40807775-40809774 Glycine max
Glyma.09G182900 2.0kb downstream 2.0kb downstream 4248 true Chr09: 40803527-40807774 Glycine max
Glyma.09G182900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 40803527-40805526 Glycine max
Glyma.09G182900 5.0kb upstream 5.0kb upstream 7248 true Chr09: 40805527-40812774 Glycine max
Glyma.09G182900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 40807775-40812774 Glycine max
Glyma.09G182900 5.0kb downstream 5.0kb downstream 7248 true Chr09: 40800527-40807774 Glycine max
Glyma.09G182900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 40800527-40805526 Glycine max
Glyma.09G182900 10.0kb upstream 10.0kb upstream 12248 true Chr09: 40805527-40817774 Glycine max
Glyma.09G182900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 40807775-40817774 Glycine max
Glyma.09G182900 10.0kb downstream 10.0kb downstream 12248 true Chr09: 40795527-40807774 Glycine max
Glyma.09G182900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 40795527-40805526 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782035 5273 Angiosperm View MSA
122296546 5265 Fabidae View MSA
124040128 5270 Rosid View MSA
123751645 5271 Pentapetalae View MSA
122774115 5272 Eudicot View MSA
121053578 5274 Embryophyte View MSA
123093595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.353075 0.0 2.78942    
cufflinks 0.513412 0.0 3.49043    
cufflinks 1.2599 0.0 7.62864   High
cufflinks 0.609504 0.0 4.00245    
cufflinks 0.183342 0.0 1.59028 Low Low
cufflinks 0.350252 0.0 2.67024    
cufflinks 0.145932 0.0 1.14232 Low Low
cufflinks 0.516958 0.0 3.64245    
cufflinks 0.563792 0.0 3.45772    
cufflinks 0.672        
cufflinks 1.946        
cufflinks 2.669        
cufflinks 0.595       Low
cufflinks 0.366       Low
cufflinks 0.963        
cufflinks 2.31        
cufflinks 0.343       Low
cufflinks 3.022       High
cufflinks 1.217        
cufflinks 3.283       High
cufflinks 0.827        
cufflinks 2.515        
cufflinks 1.425        
cufflinks 1.567        
cufflinks 3.024       High
cufflinks 0.837        

0 Strain