Gene : Glyma.09G193000 G. max Wm82.a2.v1
Defline:  (1 of 98) PF02309 - AUX/IAA family (AUX_IAA) Genomic Order:  1930
Name:  ? Glyma.09G193000 Secondary Identifier:  ? PAC:30484586
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G193000 0.5kb upstream 0.5kb upstream 4227 true Chr09: 41758792-41763018 Glycine max
Glyma.09G193000 0.5kb upstream 0.5kb upstream 500 false Chr09: 41758792-41759291 Glycine max
Glyma.09G193000 0.5kb downstream 0.5kb downstream 4227 true Chr09: 41759292-41763518 Glycine max
Glyma.09G193000 0.5kb downstream 0.5kb downstream 500 false Chr09: 41763019-41763518 Glycine max
Glyma.09G193000 1.0kb upstream 1.0kb upstream 4727 true Chr09: 41758292-41763018 Glycine max
Glyma.09G193000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41758292-41759291 Glycine max
Glyma.09G193000 1.0kb downstream 1.0kb downstream 4727 true Chr09: 41759292-41764018 Glycine max
Glyma.09G193000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41763019-41764018 Glycine max
Glyma.09G193000 2.0kb upstream 2.0kb upstream 5727 true Chr09: 41757292-41763018 Glycine max
Glyma.09G193000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41757292-41759291 Glycine max
Glyma.09G193000 2.0kb downstream 2.0kb downstream 5727 true Chr09: 41759292-41765018 Glycine max
Glyma.09G193000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41763019-41765018 Glycine max
Glyma.09G193000 5.0kb upstream 5.0kb upstream 8727 true Chr09: 41754292-41763018 Glycine max
Glyma.09G193000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41754292-41759291 Glycine max
Glyma.09G193000 5.0kb downstream 5.0kb downstream 8727 true Chr09: 41759292-41768018 Glycine max
Glyma.09G193000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41763019-41768018 Glycine max
Glyma.09G193000 10.0kb upstream 10.0kb upstream 13727 true Chr09: 41749292-41763018 Glycine max
Glyma.09G193000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41749292-41759291 Glycine max
Glyma.09G193000 10.0kb downstream 10.0kb downstream 13727 true Chr09: 41759292-41773018 Glycine max
Glyma.09G193000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41763019-41773018 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308541 5265 Fabidae View MSA
124070814 5270 Rosid View MSA
123750768 5271 Pentapetalae View MSA
122791591 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.34342 0.0 7.47924    
cufflinks 10.6125 0.0 28.6174    
cufflinks 0.556388 0.0 2.03149   Low
cufflinks 5.91545 0.0 16.6588    
cufflinks 2.40721 0.0 7.66993    
cufflinks 5.04159 0.0 14.4731    
cufflinks 12.9528 0.0 34.689    
cufflinks 32.4093 0.0 88.5837 High High
cufflinks 3.01089 0.0 9.24994    
cufflinks 14.317     High High
cufflinks 0.229       Low
cufflinks 0.727        
cufflinks 1.203        
cufflinks 0.313        
cufflinks 0.026     Low Low
cufflinks 1.172        
cufflinks 3.006        
cufflinks 1.993        
cufflinks 4.415       High
cufflinks 1.106        
cufflinks 0.644        
cufflinks 1.604        
cufflinks 1.749        
cufflinks 0.49        
cufflinks 1.294        
cufflinks 0.925        

0 Strain