Gene : Glyma.09G152700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11751:SF411 - AMINOTRANSFERASE ACS10-RELATED Genomic Order:  1527
Name:  ? Glyma.09G152700 Secondary Identifier:  ? PAC:30484667
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G152700 0.5kb upstream 0.5kb upstream 4388 true Chr09: 37521170-37525557 Glycine max
Glyma.09G152700 0.5kb upstream 0.5kb upstream 500 false Chr09: 37521170-37521669 Glycine max
Glyma.09G152700 0.5kb downstream 0.5kb downstream 4388 true Chr09: 37521670-37526057 Glycine max
Glyma.09G152700 0.5kb downstream 0.5kb downstream 500 false Chr09: 37525558-37526057 Glycine max
Glyma.09G152700 1.0kb upstream 1.0kb upstream 4888 true Chr09: 37520670-37525557 Glycine max
Glyma.09G152700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37520670-37521669 Glycine max
Glyma.09G152700 1.0kb downstream 1.0kb downstream 4888 true Chr09: 37521670-37526557 Glycine max
Glyma.09G152700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37525558-37526557 Glycine max
Glyma.09G152700 2.0kb upstream 2.0kb upstream 5888 true Chr09: 37519670-37525557 Glycine max
Glyma.09G152700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37519670-37521669 Glycine max
Glyma.09G152700 2.0kb downstream 2.0kb downstream 5888 true Chr09: 37521670-37527557 Glycine max
Glyma.09G152700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37525558-37527557 Glycine max
Glyma.09G152700 5.0kb upstream 5.0kb upstream 8888 true Chr09: 37516670-37525557 Glycine max
Glyma.09G152700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37516670-37521669 Glycine max
Glyma.09G152700 5.0kb downstream 5.0kb downstream 8888 true Chr09: 37521670-37530557 Glycine max
Glyma.09G152700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37525558-37530557 Glycine max
Glyma.09G152700 10.0kb upstream 10.0kb upstream 13888 true Chr09: 37511670-37525557 Glycine max
Glyma.09G152700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37511670-37521669 Glycine max
Glyma.09G152700 10.0kb downstream 10.0kb downstream 13888 true Chr09: 37521670-37535557 Glycine max
Glyma.09G152700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37525558-37535557 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314101 5265 Fabidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.65072 0.0 23.6754   High
cufflinks 6.27456 0.0 17.6721    
cufflinks 4.34361 0.0 12.79    
cufflinks 6.0707 0.0 17.1642    
cufflinks 5.72966 0.0 16.2747    
cufflinks 2.24302 0.0 7.23409   Low
cufflinks 7.19285 0.0 19.9819    
cufflinks 3.36615 0.0 10.264   Low
cufflinks 5.77986 0.0 16.4015    
cufflinks 1.759        
cufflinks 0.258       Low
cufflinks 2.337        
cufflinks 2.633        
cufflinks 4.119        
cufflinks 0.823        
cufflinks 4.956        
cufflinks 0.706        
cufflinks 2.697        
cufflinks 3.109        
cufflinks 6.281       High
cufflinks 0.433       Low
cufflinks 5.714       High
cufflinks 4.539        
cufflinks 0.502       Low
cufflinks 5.605       High
cufflinks 0.841        

0 Strain