Gene : Glyma.08G337500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12917:SF1 - AT13091P Genomic Order:  3375
Name:  ? Glyma.08G337500 Secondary Identifier:  ? PAC:30539206
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G337500 0.5kb upstream 0.5kb upstream 20133 true Chr08: 45436451-45456583 Glycine max
Glyma.08G337500 0.5kb upstream 0.5kb upstream 500 false Chr08: 45456084-45456583 Glycine max
Glyma.08G337500 0.5kb downstream 0.5kb downstream 20133 true Chr08: 45435951-45456083 Glycine max
Glyma.08G337500 0.5kb downstream 0.5kb downstream 500 false Chr08: 45435951-45436450 Glycine max
Glyma.08G337500 1.0kb upstream 1.0kb upstream 20633 true Chr08: 45436451-45457083 Glycine max
Glyma.08G337500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45456084-45457083 Glycine max
Glyma.08G337500 1.0kb downstream 1.0kb downstream 20633 true Chr08: 45435451-45456083 Glycine max
Glyma.08G337500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45435451-45436450 Glycine max
Glyma.08G337500 2.0kb upstream 2.0kb upstream 21633 true Chr08: 45436451-45458083 Glycine max
Glyma.08G337500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45456084-45458083 Glycine max
Glyma.08G337500 2.0kb downstream 2.0kb downstream 21633 true Chr08: 45434451-45456083 Glycine max
Glyma.08G337500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45434451-45436450 Glycine max
Glyma.08G337500 5.0kb upstream 5.0kb upstream 24633 true Chr08: 45436451-45461083 Glycine max
Glyma.08G337500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45456084-45461083 Glycine max
Glyma.08G337500 5.0kb downstream 5.0kb downstream 24633 true Chr08: 45431451-45456083 Glycine max
Glyma.08G337500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45431451-45436450 Glycine max
Glyma.08G337500 10.0kb upstream 10.0kb upstream 29633 true Chr08: 45436451-45466083 Glycine max
Glyma.08G337500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45456084-45466083 Glycine max
Glyma.08G337500 10.0kb downstream 10.0kb downstream 29633 true Chr08: 45426451-45456083 Glycine max
Glyma.08G337500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45426451-45436450 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303015 5265 Fabidae View MSA
124068287 5270 Rosid View MSA
123746680 5271 Pentapetalae View MSA
122792691 5272 Eudicot View MSA
122047571 5273 Angiosperm View MSA
121343926 5274 Embryophyte View MSA
123424063 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1146 0.0 65.3316    
cufflinks 16.59 0.0 50.5102   Low
cufflinks 22.7316 0.0 68.9284 High  
cufflinks 15.6099 0.0 55.3989   Low
cufflinks 28.5468 0.0 86.7601 High  
cufflinks 42.7281 0.0 139.114 High High
cufflinks 18.2305 0.0 71.2251    
cufflinks 25.6636 0.0 94.5301 High  
cufflinks 26.8985 0.0 81.2498 High  
cufflinks 0.687        
cufflinks 0.724        
cufflinks 0.56        
cufflinks 1.082       High
cufflinks 1.081       High
cufflinks 0.574        
cufflinks 0.533        
cufflinks 0.626        
cufflinks 0.688        
cufflinks 0.437       Low
cufflinks 0.561        
cufflinks 0.772        
cufflinks 0.57        
cufflinks 0.498       Low
cufflinks 0.747        
cufflinks 0.527        
cufflinks 0.809        

0 Strain