Gene : Glyma.08G336900 G. max Wm82.a2.v1
Defline:  (1 of 12) KOG1397 - Ca2+/H+ antiporter VCX1 and related proteins Genomic Order:  3369
Name:  ? Glyma.08G336900 Secondary Identifier:  ? PAC:30537911
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G336900 0.5kb upstream 0.5kb upstream 11763 true Chr08: 45376142-45387904 Glycine max
Glyma.08G336900 0.5kb upstream 0.5kb upstream 500 false Chr08: 45387405-45387904 Glycine max
Glyma.08G336900 0.5kb downstream 0.5kb downstream 11763 true Chr08: 45375642-45387404 Glycine max
Glyma.08G336900 0.5kb downstream 0.5kb downstream 500 false Chr08: 45375642-45376141 Glycine max
Glyma.08G336900 1.0kb upstream 1.0kb upstream 12263 true Chr08: 45376142-45388404 Glycine max
Glyma.08G336900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45387405-45388404 Glycine max
Glyma.08G336900 1.0kb downstream 1.0kb downstream 12263 true Chr08: 45375142-45387404 Glycine max
Glyma.08G336900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45375142-45376141 Glycine max
Glyma.08G336900 2.0kb upstream 2.0kb upstream 13263 true Chr08: 45376142-45389404 Glycine max
Glyma.08G336900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45387405-45389404 Glycine max
Glyma.08G336900 2.0kb downstream 2.0kb downstream 13263 true Chr08: 45374142-45387404 Glycine max
Glyma.08G336900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45374142-45376141 Glycine max
Glyma.08G336900 5.0kb upstream 5.0kb upstream 16263 true Chr08: 45376142-45392404 Glycine max
Glyma.08G336900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45387405-45392404 Glycine max
Glyma.08G336900 5.0kb downstream 5.0kb downstream 16263 true Chr08: 45371142-45387404 Glycine max
Glyma.08G336900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45371142-45376141 Glycine max
Glyma.08G336900 10.0kb upstream 10.0kb upstream 21263 true Chr08: 45376142-45397404 Glycine max
Glyma.08G336900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45387405-45397404 Glycine max
Glyma.08G336900 10.0kb downstream 10.0kb downstream 21263 true Chr08: 45366142-45387404 Glycine max
Glyma.08G336900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45366142-45376141 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121608445 5273 Angiosperm Singleton cluster - no MSA
122240242 5265 Fabidae Singleton cluster - no MSA
123985334 5270 Rosid Singleton cluster - no MSA
123560770 5271 Pentapetalae Singleton cluster - no MSA
122595567 5272 Eudicot Singleton cluster - no MSA
120880714 5274 Embryophyte Singleton cluster - no MSA
122921573 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0659939 0.0 0.26143 Low  
cufflinks 0.0947431 0.0 0.370232 Low  
cufflinks 0.0242859 0.0 0.100192 Low Low
cufflinks 0.245332 0.0 0.919553    
cufflinks 0.0427302 0.0 0.17219 Low  
cufflinks 0.198257 0.0 0.75083 Low  
cufflinks 3.10446 0.0 9.09831   High
cufflinks 0.130676 0.0 0.504152 Low  
cufflinks 0.279113 0.0 1.04084    
cufflinks 0.013     Low Low
cufflinks 0.017     Low  
cufflinks 0.014     Low Low
cufflinks 0.024     Low  
cufflinks 0.044     Low  
cufflinks 0.133       High
cufflinks 0.071     Low  
cufflinks 0.103       High
cufflinks 0.013     Low Low
cufflinks 0.047     Low  
cufflinks 0.092     Low High
cufflinks 0.017     Low  
cufflinks 0.065     Low  
cufflinks 0.031     Low  
cufflinks 0.015     Low Low
cufflinks 0.066     Low  
cufflinks 0.026     Low  

0 Strain