Gene : Glyma.08G308700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12741:SF16 - CALLOSE SYNTHASE 7-RELATED Genomic Order:  3087
Name:  ? Glyma.08G308700 Secondary Identifier:  ? PAC:30539762
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6773 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G308700 0.5kb upstream 0.5kb upstream 25254 true Chr08: 42739235-42764488 Glycine max
Glyma.08G308700 0.5kb upstream 0.5kb upstream 500 false Chr08: 42739235-42739734 Glycine max
Glyma.08G308700 0.5kb downstream 0.5kb downstream 25254 true Chr08: 42739735-42764988 Glycine max
Glyma.08G308700 0.5kb downstream 0.5kb downstream 500 false Chr08: 42764489-42764988 Glycine max
Glyma.08G308700 1.0kb upstream 1.0kb upstream 25754 true Chr08: 42738735-42764488 Glycine max
Glyma.08G308700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42738735-42739734 Glycine max
Glyma.08G308700 1.0kb downstream 1.0kb downstream 25754 true Chr08: 42739735-42765488 Glycine max
Glyma.08G308700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42764489-42765488 Glycine max
Glyma.08G308700 2.0kb upstream 2.0kb upstream 26754 true Chr08: 42737735-42764488 Glycine max
Glyma.08G308700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42737735-42739734 Glycine max
Glyma.08G308700 2.0kb downstream 2.0kb downstream 26754 true Chr08: 42739735-42766488 Glycine max
Glyma.08G308700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42764489-42766488 Glycine max
Glyma.08G308700 5.0kb upstream 5.0kb upstream 29754 true Chr08: 42734735-42764488 Glycine max
Glyma.08G308700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42734735-42739734 Glycine max
Glyma.08G308700 5.0kb downstream 5.0kb downstream 29754 true Chr08: 42739735-42769488 Glycine max
Glyma.08G308700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42764489-42769488 Glycine max
Glyma.08G308700 10.0kb upstream 10.0kb upstream 34754 true Chr08: 42729735-42764488 Glycine max
Glyma.08G308700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42729735-42739734 Glycine max
Glyma.08G308700 10.0kb downstream 10.0kb downstream 34754 true Chr08: 42739735-42774488 Glycine max
Glyma.08G308700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42764489-42774488 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305452 5265 Fabidae View MSA
124067889 5270 Rosid View MSA
123736773 5271 Pentapetalae View MSA
122788622 5272 Eudicot View MSA
122042706 5273 Angiosperm View MSA
121310004 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.07087 0.0 4.10417    
cufflinks 1.5775 0.0 6.25272    
cufflinks 3.32761 0.0 11.514   High
cufflinks 1.362 0.0 4.80668    
cufflinks 2.86332 0.0 10.1821    
cufflinks 0.391342 0.0 1.53505   Low
cufflinks 1.08626 0.0 4.15011    
cufflinks 2.25701 0.0 8.25134    
cufflinks 2.65787 0.0 9.46273    
cufflinks 0.478        
cufflinks 0.156       Low
cufflinks 0.385        
cufflinks 0.556       High
cufflinks 0.327        
cufflinks 0.062       Low
cufflinks 0.301        
cufflinks 0.278        
cufflinks 0.603       High
cufflinks 0.261        
cufflinks 0.421        
cufflinks 0.187        
cufflinks 0.38        
cufflinks 0.254        
cufflinks 0.162       Low
cufflinks 0.331        
cufflinks 0.306        

0 Strain