Gene : Glyma.08G325100 G. max Wm82.a2.v1
Defline:  (1 of 24) PF03641 - Possible lysine decarboxylase (Lysine_decarbox) Genomic Order:  3251
Name:  ? Glyma.08G325100 Secondary Identifier:  ? PAC:30539663
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G325100 0.5kb upstream 0.5kb upstream 3752 true Chr08: 44306918-44310669 Glycine max
Glyma.08G325100 0.5kb upstream 0.5kb upstream 500 false Chr08: 44306918-44307417 Glycine max
Glyma.08G325100 0.5kb downstream 0.5kb downstream 3752 true Chr08: 44307418-44311169 Glycine max
Glyma.08G325100 0.5kb downstream 0.5kb downstream 500 false Chr08: 44310670-44311169 Glycine max
Glyma.08G325100 1.0kb upstream 1.0kb upstream 4252 true Chr08: 44306418-44310669 Glycine max
Glyma.08G325100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44306418-44307417 Glycine max
Glyma.08G325100 1.0kb downstream 1.0kb downstream 4252 true Chr08: 44307418-44311669 Glycine max
Glyma.08G325100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44310670-44311669 Glycine max
Glyma.08G325100 2.0kb upstream 2.0kb upstream 5252 true Chr08: 44305418-44310669 Glycine max
Glyma.08G325100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44305418-44307417 Glycine max
Glyma.08G325100 2.0kb downstream 2.0kb downstream 5252 true Chr08: 44307418-44312669 Glycine max
Glyma.08G325100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44310670-44312669 Glycine max
Glyma.08G325100 5.0kb upstream 5.0kb upstream 8252 true Chr08: 44302418-44310669 Glycine max
Glyma.08G325100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44302418-44307417 Glycine max
Glyma.08G325100 5.0kb downstream 5.0kb downstream 8252 true Chr08: 44307418-44315669 Glycine max
Glyma.08G325100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44310670-44315669 Glycine max
Glyma.08G325100 10.0kb upstream 10.0kb upstream 13252 true Chr08: 44297418-44310669 Glycine max
Glyma.08G325100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44297418-44307417 Glycine max
Glyma.08G325100 10.0kb downstream 10.0kb downstream 13252 true Chr08: 44307418-44320669 Glycine max
Glyma.08G325100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44310670-44320669 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306475 5265 Fabidae View MSA
124063077 5270 Rosid View MSA
123749342 5271 Pentapetalae View MSA
122789500 5272 Eudicot View MSA
122047527 5273 Angiosperm View MSA
121347085 5274 Embryophyte View MSA
123427498 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.59633 0.0 24.2691   High
cufflinks 8.1135 0.0 22.9891   High
cufflinks 3.55544 0.0 11.1707   Low
cufflinks 4.37779 0.0 13.436    
cufflinks 4.42947 0.0 13.6583    
cufflinks 3.31797 0.0 10.6241   Low
cufflinks 6.06891 0.0 17.906    
cufflinks 5.2122 0.0 15.5867    
cufflinks 5.69777 0.0 16.8766    
cufflinks 2.602        
cufflinks 1.296       Low
cufflinks 2.927        
cufflinks 2.949        
cufflinks 3.065        
cufflinks 1.184       Low
cufflinks 4.52        
cufflinks 1.385       Low
cufflinks 3.417        
cufflinks 3.809        
cufflinks 4.845       High
cufflinks 1.548       Low
cufflinks 5.177       High
cufflinks 5.276       High
cufflinks 2.174        
cufflinks 4.594        
cufflinks 1.876        

0 Strain