Gene : Glyma.08G335300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11093 - RUVB-RELATED REPTIN AND PONTIN Genomic Order:  3353
Name:  ? Glyma.08G335300 Secondary Identifier:  ? PAC:30539948
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G335300 0.5kb upstream 0.5kb upstream 3732 true Chr08: 45229700-45233431 Glycine max
Glyma.08G335300 0.5kb upstream 0.5kb upstream 500 false Chr08: 45229700-45230199 Glycine max
Glyma.08G335300 0.5kb downstream 0.5kb downstream 3732 true Chr08: 45230200-45233931 Glycine max
Glyma.08G335300 0.5kb downstream 0.5kb downstream 500 false Chr08: 45233432-45233931 Glycine max
Glyma.08G335300 1.0kb upstream 1.0kb upstream 4232 true Chr08: 45229200-45233431 Glycine max
Glyma.08G335300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 45229200-45230199 Glycine max
Glyma.08G335300 1.0kb downstream 1.0kb downstream 4232 true Chr08: 45230200-45234431 Glycine max
Glyma.08G335300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 45233432-45234431 Glycine max
Glyma.08G335300 2.0kb upstream 2.0kb upstream 5232 true Chr08: 45228200-45233431 Glycine max
Glyma.08G335300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 45228200-45230199 Glycine max
Glyma.08G335300 2.0kb downstream 2.0kb downstream 5232 true Chr08: 45230200-45235431 Glycine max
Glyma.08G335300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 45233432-45235431 Glycine max
Glyma.08G335300 5.0kb upstream 5.0kb upstream 8232 true Chr08: 45225200-45233431 Glycine max
Glyma.08G335300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 45225200-45230199 Glycine max
Glyma.08G335300 5.0kb downstream 5.0kb downstream 8232 true Chr08: 45230200-45238431 Glycine max
Glyma.08G335300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 45233432-45238431 Glycine max
Glyma.08G335300 10.0kb upstream 10.0kb upstream 13232 true Chr08: 45220200-45233431 Glycine max
Glyma.08G335300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 45220200-45230199 Glycine max
Glyma.08G335300 10.0kb downstream 10.0kb downstream 13232 true Chr08: 45230200-45243431 Glycine max
Glyma.08G335300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 45233432-45243431 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307912 5265 Fabidae View MSA
124050472 5270 Rosid View MSA
123746404 5271 Pentapetalae View MSA
122786382 5272 Eudicot View MSA
122045825 5273 Angiosperm View MSA
121346627 5274 Embryophyte View MSA
123423891 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.896 0.0 31.8093    
cufflinks 15.8354 0.0 42.2496    
cufflinks 8.19426 0.0 22.3432   Low
cufflinks 16.5862 0.0 44.2676    
cufflinks 20.1997 0.0 54.2479 High  
cufflinks 9.79385 0.0 26.3467   Low
cufflinks 24.9592 0.0 67.6112 High High
cufflinks 13.2025 0.0 35.254    
cufflinks 16.4744 0.0 43.9761    
cufflinks 4.759        
cufflinks 2.565       Low
cufflinks 5.777        
cufflinks 10.429     High High
cufflinks 14.242     High High
cufflinks 4.002        
cufflinks 5.508        
cufflinks 4.906        
cufflinks 6.15        
cufflinks 9.713     High High
cufflinks 4.11        
cufflinks 3.162       Low
cufflinks 4.548        
cufflinks 6.382        
cufflinks 3.464        
cufflinks 4.18        
cufflinks 4.295        

0 Strain