Gene : Glyma.08G332200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21716 - TRANSMEMBRANE PROTEIN Genomic Order:  3322
Name:  ? Glyma.08G332200 Secondary Identifier:  ? PAC:30538326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G332200 0.5kb upstream 0.5kb upstream 4081 true Chr08: 44954877-44958957 Glycine max
Glyma.08G332200 0.5kb upstream 0.5kb upstream 500 false Chr08: 44954877-44955376 Glycine max
Glyma.08G332200 0.5kb downstream 0.5kb downstream 4081 true Chr08: 44955377-44959457 Glycine max
Glyma.08G332200 0.5kb downstream 0.5kb downstream 500 false Chr08: 44958958-44959457 Glycine max
Glyma.08G332200 1.0kb upstream 1.0kb upstream 4581 true Chr08: 44954377-44958957 Glycine max
Glyma.08G332200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44954377-44955376 Glycine max
Glyma.08G332200 1.0kb downstream 1.0kb downstream 4581 true Chr08: 44955377-44959957 Glycine max
Glyma.08G332200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44958958-44959957 Glycine max
Glyma.08G332200 2.0kb upstream 2.0kb upstream 5581 true Chr08: 44953377-44958957 Glycine max
Glyma.08G332200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44953377-44955376 Glycine max
Glyma.08G332200 2.0kb downstream 2.0kb downstream 5581 true Chr08: 44955377-44960957 Glycine max
Glyma.08G332200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44958958-44960957 Glycine max
Glyma.08G332200 5.0kb upstream 5.0kb upstream 8581 true Chr08: 44950377-44958957 Glycine max
Glyma.08G332200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44950377-44955376 Glycine max
Glyma.08G332200 5.0kb downstream 5.0kb downstream 8581 true Chr08: 44955377-44963957 Glycine max
Glyma.08G332200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44958958-44963957 Glycine max
Glyma.08G332200 10.0kb upstream 10.0kb upstream 13581 true Chr08: 44945377-44958957 Glycine max
Glyma.08G332200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44945377-44955376 Glycine max
Glyma.08G332200 10.0kb downstream 10.0kb downstream 13581 true Chr08: 44955377-44968957 Glycine max
Glyma.08G332200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44958958-44968957 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299195 5265 Fabidae View MSA
124073302 5270 Rosid View MSA
123750556 5271 Pentapetalae View MSA
122792038 5272 Eudicot View MSA
122049890 5273 Angiosperm View MSA
121348658 5274 Embryophyte View MSA
123426031 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.26333 0.0 17.1034    
cufflinks 4.58991 0.0 12.8669    
cufflinks 1.82435 0.0 5.76333   Low
cufflinks 5.32903 0.0 14.7357    
cufflinks 7.93643 0.0 21.3842    
cufflinks 13.0039 0.0 34.7024   High
cufflinks 3.82308 0.0 10.9396    
cufflinks 8.07466 0.0 21.7468    
cufflinks 5.41918 0.0 14.9528    
cufflinks 8.134     High High
cufflinks 0.6       Low
cufflinks 2.574        
cufflinks 7.264     High High
cufflinks 5.713        
cufflinks 0.417       Low
cufflinks 3.532        
cufflinks 1.842        
cufflinks 3.032        
cufflinks 4.435        
cufflinks 3.682        
cufflinks 0.666       Low
cufflinks 3.987        
cufflinks 4.237        
cufflinks 1.13        
cufflinks 3.542        
cufflinks 2.315        

0 Strain