Gene : Glyma.08G304200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31407:SF6 - OXYGEN-EVOLVING ENHANCER PROTEIN 2-1, CHLOROPLASTIC-RELATED Genomic Order:  3042
Name:  ? Glyma.08G304200 Secondary Identifier:  ? PAC:30536886
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G304200 0.5kb upstream 0.5kb upstream 3486 true Chr08: 42258956-42262441 Glycine max
Glyma.08G304200 0.5kb upstream 0.5kb upstream 500 false Chr08: 42258956-42259455 Glycine max
Glyma.08G304200 0.5kb downstream 0.5kb downstream 3486 true Chr08: 42259456-42262941 Glycine max
Glyma.08G304200 0.5kb downstream 0.5kb downstream 500 false Chr08: 42262442-42262941 Glycine max
Glyma.08G304200 1.0kb upstream 1.0kb upstream 3986 true Chr08: 42258456-42262441 Glycine max
Glyma.08G304200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 42258456-42259455 Glycine max
Glyma.08G304200 1.0kb downstream 1.0kb downstream 3986 true Chr08: 42259456-42263441 Glycine max
Glyma.08G304200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 42262442-42263441 Glycine max
Glyma.08G304200 2.0kb upstream 2.0kb upstream 4986 true Chr08: 42257456-42262441 Glycine max
Glyma.08G304200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 42257456-42259455 Glycine max
Glyma.08G304200 2.0kb downstream 2.0kb downstream 4986 true Chr08: 42259456-42264441 Glycine max
Glyma.08G304200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 42262442-42264441 Glycine max
Glyma.08G304200 5.0kb upstream 5.0kb upstream 7986 true Chr08: 42254456-42262441 Glycine max
Glyma.08G304200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 42254456-42259455 Glycine max
Glyma.08G304200 5.0kb downstream 5.0kb downstream 7986 true Chr08: 42259456-42267441 Glycine max
Glyma.08G304200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 42262442-42267441 Glycine max
Glyma.08G304200 10.0kb upstream 10.0kb upstream 12986 true Chr08: 42249456-42262441 Glycine max
Glyma.08G304200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 42249456-42259455 Glycine max
Glyma.08G304200 10.0kb downstream 10.0kb downstream 12986 true Chr08: 42259456-42272441 Glycine max
Glyma.08G304200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 42262442-42272441 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311482 5265 Fabidae View MSA
124061406 5270 Rosid View MSA
123746679 5271 Pentapetalae View MSA
122793257 5272 Eudicot View MSA
122047548 5273 Angiosperm View MSA
121349110 5274 Embryophyte View MSA
123424877 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 166.459 0.0 548.426 High High
cufflinks 122.729 0.0 381.29 High High
cufflinks 11.8566 0.0 32.3063    
cufflinks 59.3362 0.0 166.567 High  
cufflinks 7.30827 0.0 20.8271    
cufflinks 11.168 0.0 30.5905    
cufflinks 47.5602 0.0 130.716 High  
cufflinks 29.0925 0.0 77.9243 High  
cufflinks 1.05745 0.0 3.78842   Low
cufflinks 69.384     High  
cufflinks 0.039     Low Low
cufflinks 16.601     High  
cufflinks 0.199        
cufflinks 0.128        
cufflinks 0.025     Low Low
cufflinks 230.711     High High
cufflinks 0.069        
cufflinks 22.536     High  
cufflinks 63.271     High  
cufflinks 217.318     High High
cufflinks 0.022     Low Low
cufflinks 207.476     High High
cufflinks 253.4     High High
cufflinks 0.025     Low Low
cufflinks 252.609     High High
cufflinks 0.044     Low Low

0 Strain