Gene : Glyma.08G227500 G. max Wm82.a2.v1
Defline:  (1 of 28) PF03101//PF04434//PF10551 - FAR1 DNA-binding domain (FAR1) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  2275
Name:  ? Glyma.08G227500 Secondary Identifier:  ? PAC:30536200
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G227500 0.5kb upstream 0.5kb upstream 8911 true Chr08: 18518682-18527592 Glycine max
Glyma.08G227500 0.5kb upstream 0.5kb upstream 500 false Chr08: 18527093-18527592 Glycine max
Glyma.08G227500 0.5kb downstream 0.5kb downstream 8911 true Chr08: 18518182-18527092 Glycine max
Glyma.08G227500 0.5kb downstream 0.5kb downstream 500 false Chr08: 18518182-18518681 Glycine max
Glyma.08G227500 1.0kb upstream 1.0kb upstream 9411 true Chr08: 18518682-18528092 Glycine max
Glyma.08G227500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 18527093-18528092 Glycine max
Glyma.08G227500 1.0kb downstream 1.0kb downstream 9411 true Chr08: 18517682-18527092 Glycine max
Glyma.08G227500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 18517682-18518681 Glycine max
Glyma.08G227500 2.0kb upstream 2.0kb upstream 10411 true Chr08: 18518682-18529092 Glycine max
Glyma.08G227500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 18527093-18529092 Glycine max
Glyma.08G227500 2.0kb downstream 2.0kb downstream 10411 true Chr08: 18516682-18527092 Glycine max
Glyma.08G227500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 18516682-18518681 Glycine max
Glyma.08G227500 5.0kb upstream 5.0kb upstream 13411 true Chr08: 18518682-18532092 Glycine max
Glyma.08G227500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 18527093-18532092 Glycine max
Glyma.08G227500 5.0kb downstream 5.0kb downstream 13411 true Chr08: 18513682-18527092 Glycine max
Glyma.08G227500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 18513682-18518681 Glycine max
Glyma.08G227500 10.0kb upstream 10.0kb upstream 18411 true Chr08: 18518682-18537092 Glycine max
Glyma.08G227500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 18527093-18537092 Glycine max
Glyma.08G227500 10.0kb downstream 10.0kb downstream 18411 true Chr08: 18508682-18527092 Glycine max
Glyma.08G227500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 18508682-18518681 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305943 5265 Fabidae View MSA
124064259 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.74221 0.0 19.2463    
cufflinks 3.52316 0.0 15.5343    
cufflinks 2.80277 0.0 9.84661    
cufflinks 4.19602 0.0 20.0646    
cufflinks 2.70284 0.0 15.6264    
cufflinks 1.91616 0.0 9.48998   Low
cufflinks 4.62662 0.0 22.0451    
cufflinks 4.1516 0.0 16.5412    
cufflinks 12.0504 0.0 56.7966   High
cufflinks 0.193        
cufflinks 0.036     Low Low
cufflinks 0.201        
cufflinks 0.139        
cufflinks 0.131        
cufflinks 0.27        
cufflinks 0.196        
cufflinks 0.067     Low Low
cufflinks 0.266        
cufflinks 0.239        
cufflinks 0.208        
cufflinks 0.048     Low Low
cufflinks 0.236        
cufflinks 0.235        
cufflinks 0.054     Low Low
cufflinks 0.215        
cufflinks 0.05     Low Low

0 Strain