Gene : Glyma.08G235900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR27006:SF44 - LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE Genomic Order:  2359
Name:  ? Glyma.08G235900 Secondary Identifier:  ? PAC:30539013
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G235900 0.5kb upstream 0.5kb upstream 18477 true Chr08: 19899829-19918305 Glycine max
Glyma.08G235900 0.5kb upstream 0.5kb upstream 500 false Chr08: 19917806-19918305 Glycine max
Glyma.08G235900 0.5kb downstream 0.5kb downstream 18477 true Chr08: 19899329-19917805 Glycine max
Glyma.08G235900 0.5kb downstream 0.5kb downstream 500 false Chr08: 19899329-19899828 Glycine max
Glyma.08G235900 1.0kb upstream 1.0kb upstream 18977 true Chr08: 19899829-19918805 Glycine max
Glyma.08G235900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19917806-19918805 Glycine max
Glyma.08G235900 1.0kb downstream 1.0kb downstream 18977 true Chr08: 19898829-19917805 Glycine max
Glyma.08G235900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19898829-19899828 Glycine max
Glyma.08G235900 2.0kb upstream 2.0kb upstream 19977 true Chr08: 19899829-19919805 Glycine max
Glyma.08G235900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19917806-19919805 Glycine max
Glyma.08G235900 2.0kb downstream 2.0kb downstream 19977 true Chr08: 19897829-19917805 Glycine max
Glyma.08G235900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19897829-19899828 Glycine max
Glyma.08G235900 5.0kb upstream 5.0kb upstream 22977 true Chr08: 19899829-19922805 Glycine max
Glyma.08G235900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19917806-19922805 Glycine max
Glyma.08G235900 5.0kb downstream 5.0kb downstream 22977 true Chr08: 19894829-19917805 Glycine max
Glyma.08G235900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19894829-19899828 Glycine max
Glyma.08G235900 10.0kb upstream 10.0kb upstream 27977 true Chr08: 19899829-19927805 Glycine max
Glyma.08G235900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19917806-19927805 Glycine max
Glyma.08G235900 10.0kb downstream 10.0kb downstream 27977 true Chr08: 19889829-19917805 Glycine max
Glyma.08G235900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19889829-19899828 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301017 5265 Fabidae View MSA
124072019 5270 Rosid View MSA
123750950 5271 Pentapetalae View MSA
122793307 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.96914 0.0 20.8675    
cufflinks 0.471841 0.0 2.70878    
cufflinks 0.709732 0.0 2.81556    
cufflinks 1.19519 0.0 5.39504    
cufflinks 4.17469 0.0 13.3609    
cufflinks 13.7371 0.0 47.6754   High
cufflinks 0.0815009 0.0 0.318228 Low Low
cufflinks 3.94329 0.0 12.7413    
cufflinks 10.2045 0.0 30.4694    
cufflinks 0.053     Low  
cufflinks 7.785     High High
cufflinks 0.096     Low  
cufflinks 1.023        
cufflinks 0.149        
cufflinks 0.327        
cufflinks 0.033     Low  
cufflinks 4.864       High
cufflinks 0.049     Low  
cufflinks 0.056     Low  
cufflinks 0.015     Low Low
cufflinks 7.612     High High
cufflinks 0.076     Low  
cufflinks 0.022     Low Low
cufflinks 9.099     High High
cufflinks 0.021     Low Low
cufflinks 6.55     High High

0 Strain