Gene : Glyma.08G233200 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11011:SF25 - FATTY ACYL-COA REDUCTASE 3-RELATED Genomic Order:  2332
Name:  ? Glyma.08G233200 Secondary Identifier:  ? PAC:30539270
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6733 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G233200 0.5kb upstream 0.5kb upstream 6427 true Chr08: 19351200-19357626 Glycine max
Glyma.08G233200 0.5kb upstream 0.5kb upstream 500 false Chr08: 19351200-19351699 Glycine max
Glyma.08G233200 0.5kb downstream 0.5kb downstream 6427 true Chr08: 19351700-19358126 Glycine max
Glyma.08G233200 0.5kb downstream 0.5kb downstream 500 false Chr08: 19357627-19358126 Glycine max
Glyma.08G233200 1.0kb upstream 1.0kb upstream 6927 true Chr08: 19350700-19357626 Glycine max
Glyma.08G233200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19350700-19351699 Glycine max
Glyma.08G233200 1.0kb downstream 1.0kb downstream 6927 true Chr08: 19351700-19358626 Glycine max
Glyma.08G233200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19357627-19358626 Glycine max
Glyma.08G233200 2.0kb upstream 2.0kb upstream 7927 true Chr08: 19349700-19357626 Glycine max
Glyma.08G233200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19349700-19351699 Glycine max
Glyma.08G233200 2.0kb downstream 2.0kb downstream 7927 true Chr08: 19351700-19359626 Glycine max
Glyma.08G233200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19357627-19359626 Glycine max
Glyma.08G233200 5.0kb upstream 5.0kb upstream 10927 true Chr08: 19346700-19357626 Glycine max
Glyma.08G233200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19346700-19351699 Glycine max
Glyma.08G233200 5.0kb downstream 5.0kb downstream 10927 true Chr08: 19351700-19362626 Glycine max
Glyma.08G233200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19357627-19362626 Glycine max
Glyma.08G233200 10.0kb upstream 10.0kb upstream 15927 true Chr08: 19341700-19357626 Glycine max
Glyma.08G233200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19341700-19351699 Glycine max
Glyma.08G233200 10.0kb downstream 10.0kb downstream 15927 true Chr08: 19351700-19367626 Glycine max
Glyma.08G233200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19357627-19367626 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617932 5273 Angiosperm View MSA
122254514 5265 Fabidae View MSA
123996639 5270 Rosid View MSA
123571074 5271 Pentapetalae View MSA
122605804 5272 Eudicot View MSA
123429082 5275 Viridiplantae View MSA
120890062 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0206961 0.0 0.0935986 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0109485 0.0 0.0526407 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0816128 0.0 0.332608 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain