Gene : Glyma.08G240500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31558:SF1 - F7A19.6 PROTEIN-RELATED Genomic Order:  2405
Name:  ? Glyma.08G240500 Secondary Identifier:  ? PAC:30538185
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G240500 0.5kb upstream 0.5kb upstream 6779 true Chr08: 20519438-20526216 Glycine max
Glyma.08G240500 0.5kb upstream 0.5kb upstream 500 false Chr08: 20519438-20519937 Glycine max
Glyma.08G240500 0.5kb downstream 0.5kb downstream 6779 true Chr08: 20519938-20526716 Glycine max
Glyma.08G240500 0.5kb downstream 0.5kb downstream 500 false Chr08: 20526217-20526716 Glycine max
Glyma.08G240500 1.0kb upstream 1.0kb upstream 7279 true Chr08: 20518938-20526216 Glycine max
Glyma.08G240500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20518938-20519937 Glycine max
Glyma.08G240500 1.0kb downstream 1.0kb downstream 7279 true Chr08: 20519938-20527216 Glycine max
Glyma.08G240500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20526217-20527216 Glycine max
Glyma.08G240500 2.0kb upstream 2.0kb upstream 8279 true Chr08: 20517938-20526216 Glycine max
Glyma.08G240500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20517938-20519937 Glycine max
Glyma.08G240500 2.0kb downstream 2.0kb downstream 8279 true Chr08: 20519938-20528216 Glycine max
Glyma.08G240500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20526217-20528216 Glycine max
Glyma.08G240500 5.0kb upstream 5.0kb upstream 11279 true Chr08: 20514938-20526216 Glycine max
Glyma.08G240500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20514938-20519937 Glycine max
Glyma.08G240500 5.0kb downstream 5.0kb downstream 11279 true Chr08: 20519938-20531216 Glycine max
Glyma.08G240500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20526217-20531216 Glycine max
Glyma.08G240500 10.0kb upstream 10.0kb upstream 16279 true Chr08: 20509938-20526216 Glycine max
Glyma.08G240500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20509938-20519937 Glycine max
Glyma.08G240500 10.0kb downstream 10.0kb downstream 16279 true Chr08: 20519938-20536216 Glycine max
Glyma.08G240500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20526217-20536216 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301164 5265 Fabidae View MSA
124073265 5270 Rosid View MSA
123751293 5271 Pentapetalae View MSA
122789069 5272 Eudicot View MSA
122042640 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033105 0.0 0.140388 Low Low
cufflinks 8.32647 0.0 33.8565   High
cufflinks 7.48014 0.0 29.6197    
cufflinks 1.52272 0.0 10.9197    
cufflinks 3.50947 0.0 19.1145    
cufflinks 2.30839 0.0 11.0324    
cufflinks 0.914665 0.0 6.90737    
cufflinks 2.36792 0.0 15.0839    
cufflinks 1.19475 0.0 5.82845    
cufflinks 0.444       High
cufflinks 0.025     Low  
cufflinks 0.549       High
cufflinks 0.19        
cufflinks 0.23        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.019     Low  
cufflinks 0.583       High
cufflinks 0.951       High
cufflinks 0.026     Low  
cufflinks 0.033     Low  
cufflinks 0.026     Low  
cufflinks 0.031     Low  
cufflinks 0.018     Low Low
cufflinks 0.029     Low  
cufflinks 0.068        

0 Strain