Gene : Glyma.08G217500 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR21596:SF3 - F16A14.2-RELATED Genomic Order:  2175
Name:  ? Glyma.08G217500 Secondary Identifier:  ? PAC:30535966
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G217500 0.5kb upstream 0.5kb upstream 5457 true Chr08: 17658063-17663519 Glycine max
Glyma.08G217500 0.5kb upstream 0.5kb upstream 500 false Chr08: 17658063-17658562 Glycine max
Glyma.08G217500 0.5kb downstream 0.5kb downstream 5457 true Chr08: 17658563-17664019 Glycine max
Glyma.08G217500 0.5kb downstream 0.5kb downstream 500 false Chr08: 17663520-17664019 Glycine max
Glyma.08G217500 1.0kb upstream 1.0kb upstream 5957 true Chr08: 17657563-17663519 Glycine max
Glyma.08G217500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17657563-17658562 Glycine max
Glyma.08G217500 1.0kb downstream 1.0kb downstream 5957 true Chr08: 17658563-17664519 Glycine max
Glyma.08G217500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17663520-17664519 Glycine max
Glyma.08G217500 2.0kb upstream 2.0kb upstream 6957 true Chr08: 17656563-17663519 Glycine max
Glyma.08G217500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17656563-17658562 Glycine max
Glyma.08G217500 2.0kb downstream 2.0kb downstream 6957 true Chr08: 17658563-17665519 Glycine max
Glyma.08G217500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17663520-17665519 Glycine max
Glyma.08G217500 5.0kb upstream 5.0kb upstream 9957 true Chr08: 17653563-17663519 Glycine max
Glyma.08G217500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17653563-17658562 Glycine max
Glyma.08G217500 5.0kb downstream 5.0kb downstream 9957 true Chr08: 17658563-17668519 Glycine max
Glyma.08G217500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17663520-17668519 Glycine max
Glyma.08G217500 10.0kb upstream 10.0kb upstream 14957 true Chr08: 17648563-17663519 Glycine max
Glyma.08G217500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17648563-17658562 Glycine max
Glyma.08G217500 10.0kb downstream 10.0kb downstream 14957 true Chr08: 17658563-17673519 Glycine max
Glyma.08G217500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17663520-17673519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299691 5265 Fabidae View MSA
124066468 5270 Rosid View MSA
123741762 5271 Pentapetalae View MSA
122795900 5272 Eudicot View MSA
122047890 5273 Angiosperm View MSA
121350157 5274 Embryophyte View MSA
123381596 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.04727 0.0 27.8754    
cufflinks 15.9871 0.0 61.6079    
cufflinks 7.03574 0.0 23.9297   Low
cufflinks 16.727 0.0 64.8463    
cufflinks 11.4454 0.0 42.8863    
cufflinks 7.97024 0.0 30.1644    
cufflinks 29.18 0.0 112.384 High High
cufflinks 11.724 0.0 44.0565    
cufflinks 15.3616 0.0 58.8496    
cufflinks 2.681        
cufflinks 0.516       Low
cufflinks 3.261        
cufflinks 2.964        
cufflinks 3.22        
cufflinks 2.511        
cufflinks 2.116        
cufflinks 0.939       Low
cufflinks 4.204       High
cufflinks 3.92       High
cufflinks 2.243        
cufflinks 0.801       Low
cufflinks 2.398        
cufflinks 2.219        
cufflinks 0.536       Low
cufflinks 2.102        
cufflinks 1.197        

0 Strain