Gene : Glyma.08G180900 G. max Wm82.a2.v1
Defline:  (1 of 9) 3.2.1.37//3.2.1.55 - Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  1809
Name:  ? Glyma.08G180900 Secondary Identifier:  ? PAC:30537456
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G180900 0.5kb upstream 0.5kb upstream 5096 true Chr08: 14516042-14521137 Glycine max
Glyma.08G180900 0.5kb upstream 0.5kb upstream 500 false Chr08: 14516042-14516541 Glycine max
Glyma.08G180900 0.5kb downstream 0.5kb downstream 5096 true Chr08: 14516542-14521637 Glycine max
Glyma.08G180900 0.5kb downstream 0.5kb downstream 500 false Chr08: 14521138-14521637 Glycine max
Glyma.08G180900 1.0kb upstream 1.0kb upstream 5596 true Chr08: 14515542-14521137 Glycine max
Glyma.08G180900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 14515542-14516541 Glycine max
Glyma.08G180900 1.0kb downstream 1.0kb downstream 5596 true Chr08: 14516542-14522137 Glycine max
Glyma.08G180900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 14521138-14522137 Glycine max
Glyma.08G180900 2.0kb upstream 2.0kb upstream 6596 true Chr08: 14514542-14521137 Glycine max
Glyma.08G180900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 14514542-14516541 Glycine max
Glyma.08G180900 2.0kb downstream 2.0kb downstream 6596 true Chr08: 14516542-14523137 Glycine max
Glyma.08G180900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 14521138-14523137 Glycine max
Glyma.08G180900 5.0kb upstream 5.0kb upstream 9596 true Chr08: 14511542-14521137 Glycine max
Glyma.08G180900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 14511542-14516541 Glycine max
Glyma.08G180900 5.0kb downstream 5.0kb downstream 9596 true Chr08: 14516542-14526137 Glycine max
Glyma.08G180900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 14521138-14526137 Glycine max
Glyma.08G180900 10.0kb upstream 10.0kb upstream 14596 true Chr08: 14506542-14521137 Glycine max
Glyma.08G180900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 14506542-14516541 Glycine max
Glyma.08G180900 10.0kb downstream 10.0kb downstream 14596 true Chr08: 14516542-14531137 Glycine max
Glyma.08G180900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 14521138-14531137 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315174 5265 Fabidae View MSA
124062868 5270 Rosid View MSA
123737560 5271 Pentapetalae View MSA
122787733 5272 Eudicot View MSA
122044178 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.47113 0.0 24.7792    
cufflinks 7.30667 0.0 27.1397    
cufflinks 5.48431 0.0 17.2163    
cufflinks 4.83732 0.0 18.8185    
cufflinks 2.19069 0.0 6.615   Low
cufflinks 3.57592 0.0 12.1389    
cufflinks 2.84915 0.0 11.3089    
cufflinks 12.6975 0.0 46.2965   High
cufflinks 3.75192 0.0 15.6861    
cufflinks 2.2        
cufflinks 0.165       Low
cufflinks 3.946       High
cufflinks 0.889        
cufflinks 1.076        
cufflinks 1.489        
cufflinks 2.168        
cufflinks 0.575        
cufflinks 0.492        
cufflinks 5.272       High
cufflinks 2.764        
cufflinks 0.32        
cufflinks 3.078        
cufflinks 2.054        
cufflinks 0.072       Low
cufflinks 1.755        
cufflinks 0.377        

0 Strain