Gene : Glyma.08G189200 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1892
Name:  ? Glyma.08G189200 Secondary Identifier:  ? PAC:30538521
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G189200 0.5kb upstream 0.5kb upstream 6096 true Chr08: 15172404-15178499 Glycine max
Glyma.08G189200 0.5kb upstream 0.5kb upstream 500 false Chr08: 15172404-15172903 Glycine max
Glyma.08G189200 0.5kb downstream 0.5kb downstream 6096 true Chr08: 15172904-15178999 Glycine max
Glyma.08G189200 0.5kb downstream 0.5kb downstream 500 false Chr08: 15178500-15178999 Glycine max
Glyma.08G189200 1.0kb upstream 1.0kb upstream 6596 true Chr08: 15171904-15178499 Glycine max
Glyma.08G189200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15171904-15172903 Glycine max
Glyma.08G189200 1.0kb downstream 1.0kb downstream 6596 true Chr08: 15172904-15179499 Glycine max
Glyma.08G189200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15178500-15179499 Glycine max
Glyma.08G189200 2.0kb upstream 2.0kb upstream 7596 true Chr08: 15170904-15178499 Glycine max
Glyma.08G189200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15170904-15172903 Glycine max
Glyma.08G189200 2.0kb downstream 2.0kb downstream 7596 true Chr08: 15172904-15180499 Glycine max
Glyma.08G189200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15178500-15180499 Glycine max
Glyma.08G189200 5.0kb upstream 5.0kb upstream 10596 true Chr08: 15167904-15178499 Glycine max
Glyma.08G189200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15167904-15172903 Glycine max
Glyma.08G189200 5.0kb downstream 5.0kb downstream 10596 true Chr08: 15172904-15183499 Glycine max
Glyma.08G189200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15178500-15183499 Glycine max
Glyma.08G189200 10.0kb upstream 10.0kb upstream 15596 true Chr08: 15162904-15178499 Glycine max
Glyma.08G189200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15162904-15172903 Glycine max
Glyma.08G189200 10.0kb downstream 10.0kb downstream 15596 true Chr08: 15172904-15188499 Glycine max
Glyma.08G189200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15178500-15188499 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783054 5273 Angiosperm View MSA
122316590 5265 Fabidae View MSA
124037112 5270 Rosid View MSA
123754335 5271 Pentapetalae View MSA
122775718 5272 Eudicot View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.44895 0.0 4.9549   Low
cufflinks 39.2873 0.0 165.963 High High
cufflinks 40.0434 0.0 171.977 High High
cufflinks 4.23181 0.0 16.2109    
cufflinks 2.83049 0.0 12.3041    
cufflinks 62.876 0.0 270.71 High High
cufflinks 1.93927 0.0 8.02414    
cufflinks 3.95553 0.0 15.2297    
cufflinks 10.7915 0.0 37.6241    
cufflinks 0.642        
cufflinks 1.852        
cufflinks 7.613     High High
cufflinks 1.629        
cufflinks 0.32       Low
cufflinks 0.68        
cufflinks 1.148        
cufflinks 1.099        
cufflinks 3.142        
cufflinks 19.029     High High
cufflinks 0.603        
cufflinks 3.935        
cufflinks 0.969        
cufflinks 1.413        
cufflinks 5.096        
cufflinks 0.649        
cufflinks 7.296     High High

0 Strain