Gene : Glyma.08G123400 G. max Wm82.a2.v1
Defline:  (1 of 8) PF03004 - Plant transposase (Ptta/En/Spm family) (Transposase_24) Genomic Order:  1234
Name:  ? Glyma.08G123400 Secondary Identifier:  ? PAC:30537187
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G123400 0.5kb upstream 0.5kb upstream 4384 true Chr08: 9486565-9490948 Glycine max
Glyma.08G123400 0.5kb upstream 0.5kb upstream 500 false Chr08: 9490449-9490948 Glycine max
Glyma.08G123400 0.5kb downstream 0.5kb downstream 4384 true Chr08: 9486065-9490448 Glycine max
Glyma.08G123400 0.5kb downstream 0.5kb downstream 500 false Chr08: 9486065-9486564 Glycine max
Glyma.08G123400 1.0kb upstream 1.0kb upstream 4884 true Chr08: 9486565-9491448 Glycine max
Glyma.08G123400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9490449-9491448 Glycine max
Glyma.08G123400 1.0kb downstream 1.0kb downstream 4884 true Chr08: 9485565-9490448 Glycine max
Glyma.08G123400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9485565-9486564 Glycine max
Glyma.08G123400 2.0kb upstream 2.0kb upstream 5884 true Chr08: 9486565-9492448 Glycine max
Glyma.08G123400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9490449-9492448 Glycine max
Glyma.08G123400 2.0kb downstream 2.0kb downstream 5884 true Chr08: 9484565-9490448 Glycine max
Glyma.08G123400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9484565-9486564 Glycine max
Glyma.08G123400 5.0kb upstream 5.0kb upstream 8884 true Chr08: 9486565-9495448 Glycine max
Glyma.08G123400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9490449-9495448 Glycine max
Glyma.08G123400 5.0kb downstream 5.0kb downstream 8884 true Chr08: 9481565-9490448 Glycine max
Glyma.08G123400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9481565-9486564 Glycine max
Glyma.08G123400 10.0kb upstream 10.0kb upstream 13884 true Chr08: 9486565-9500448 Glycine max
Glyma.08G123400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9490449-9500448 Glycine max
Glyma.08G123400 10.0kb downstream 10.0kb downstream 13884 true Chr08: 9476565-9490448 Glycine max
Glyma.08G123400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9476565-9486564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254234 5265 Fabidae View MSA
123996485 5270 Rosid View MSA
123753147 5271 Pentapetalae View MSA
122797842 5272 Eudicot View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.191 0.0 4.04329    
cufflinks 1.47729 0.0 4.89156   High
cufflinks 0.8993 0.0 3.12932    
cufflinks 0.640754 0.0 2.29476    
cufflinks 0.178471 0.0 0.683627 Low Low
cufflinks 0.0714281 0.0 0.283678 Low Low
cufflinks 0.742728 0.0 2.63759    
cufflinks 0.467198 0.0 1.70798    
cufflinks 0.667313 0.0 2.38657    
cufflinks 0.441        
cufflinks 0.174       Low
cufflinks 0.641        
cufflinks 0.49        
cufflinks 0.128       Low
cufflinks 0.32        
cufflinks 3.489       High
cufflinks 0.388        
cufflinks 0.894        
cufflinks 1.045        
cufflinks 3.041       High
cufflinks 0.187       Low
cufflinks 3.52       High
cufflinks 3.256       High
cufflinks 0.189       Low
cufflinks 3.885       High
cufflinks 0.369        

0 Strain