Gene : Glyma.08G043100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32227:SF61 - GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 3 Genomic Order:  431
Name:  ? Glyma.08G043100 Secondary Identifier:  ? PAC:30537165
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G043100 0.5kb upstream 0.5kb upstream 5623 true Chr08: 3408321-3413943 Glycine max
Glyma.08G043100 0.5kb upstream 0.5kb upstream 500 false Chr08: 3408321-3408820 Glycine max
Glyma.08G043100 0.5kb downstream 0.5kb downstream 5623 true Chr08: 3408821-3414443 Glycine max
Glyma.08G043100 0.5kb downstream 0.5kb downstream 500 false Chr08: 3413944-3414443 Glycine max
Glyma.08G043100 1.0kb upstream 1.0kb upstream 6123 true Chr08: 3407821-3413943 Glycine max
Glyma.08G043100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3407821-3408820 Glycine max
Glyma.08G043100 1.0kb downstream 1.0kb downstream 6123 true Chr08: 3408821-3414943 Glycine max
Glyma.08G043100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3413944-3414943 Glycine max
Glyma.08G043100 2.0kb upstream 2.0kb upstream 7123 true Chr08: 3406821-3413943 Glycine max
Glyma.08G043100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3406821-3408820 Glycine max
Glyma.08G043100 2.0kb downstream 2.0kb downstream 7123 true Chr08: 3408821-3415943 Glycine max
Glyma.08G043100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3413944-3415943 Glycine max
Glyma.08G043100 5.0kb upstream 5.0kb upstream 10123 true Chr08: 3403821-3413943 Glycine max
Glyma.08G043100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3403821-3408820 Glycine max
Glyma.08G043100 5.0kb downstream 5.0kb downstream 10123 true Chr08: 3408821-3418943 Glycine max
Glyma.08G043100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3413944-3418943 Glycine max
Glyma.08G043100 10.0kb upstream 10.0kb upstream 15123 true Chr08: 3398821-3413943 Glycine max
Glyma.08G043100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3398821-3408820 Glycine max
Glyma.08G043100 10.0kb downstream 10.0kb downstream 15123 true Chr08: 3408821-3423943 Glycine max
Glyma.08G043100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3413944-3423943 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302522 5265 Fabidae View MSA
124061545 5270 Rosid View MSA
123741211 5271 Pentapetalae View MSA
122791300 5272 Eudicot View MSA
122043027 5273 Angiosperm View MSA
121351661 5274 Embryophyte View MSA
123382266 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.359222 0.0 2.60489   Low
cufflinks 1.60891 0.0 6.17452    
cufflinks 0.243507 0.0 1.21031   Low
cufflinks 1.69098 0.0 9.0722    
cufflinks 1.16751 0.0 8.01979    
cufflinks 0.321688 0.0 1.61753   Low
cufflinks 4.5961 0.0 27.3437   High
cufflinks 2.28109 0.0 7.92271    
cufflinks 1.80012 0.0 13.1337    
cufflinks 0.214       High
cufflinks 0.013     Low Low
cufflinks 0.03     Low  
cufflinks 0.082     Low  
cufflinks 0.097        
cufflinks 0.028     Low  
cufflinks 0.056     Low  
cufflinks 0.046     Low  
cufflinks 0.043     Low  
cufflinks 0.123       High
cufflinks 0.037     Low  
cufflinks 0.027     Low  
cufflinks 0.047     Low  
cufflinks 0.121       High
cufflinks 0.009     Low Low
cufflinks 0.052     Low  
cufflinks 0.039     Low  

0 Strain