Gene : Glyma.08G035000 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  350
Name:  ? Glyma.08G035000 Secondary Identifier:  ? PAC:30536255
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G035000 0.5kb upstream 0.5kb upstream 2007 true Chr08: 2780328-2782334 Glycine max
Glyma.08G035000 0.5kb upstream 0.5kb upstream 500 false Chr08: 2781835-2782334 Glycine max
Glyma.08G035000 0.5kb downstream 0.5kb downstream 2007 true Chr08: 2779828-2781834 Glycine max
Glyma.08G035000 0.5kb downstream 0.5kb downstream 500 false Chr08: 2779828-2780327 Glycine max
Glyma.08G035000 1.0kb upstream 1.0kb upstream 2507 true Chr08: 2780328-2782834 Glycine max
Glyma.08G035000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2781835-2782834 Glycine max
Glyma.08G035000 1.0kb downstream 1.0kb downstream 2507 true Chr08: 2779328-2781834 Glycine max
Glyma.08G035000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2779328-2780327 Glycine max
Glyma.08G035000 2.0kb upstream 2.0kb upstream 3507 true Chr08: 2780328-2783834 Glycine max
Glyma.08G035000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2781835-2783834 Glycine max
Glyma.08G035000 2.0kb downstream 2.0kb downstream 3507 true Chr08: 2778328-2781834 Glycine max
Glyma.08G035000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2778328-2780327 Glycine max
Glyma.08G035000 5.0kb upstream 5.0kb upstream 6507 true Chr08: 2780328-2786834 Glycine max
Glyma.08G035000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2781835-2786834 Glycine max
Glyma.08G035000 5.0kb downstream 5.0kb downstream 6507 true Chr08: 2775328-2781834 Glycine max
Glyma.08G035000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2775328-2780327 Glycine max
Glyma.08G035000 10.0kb upstream 10.0kb upstream 11507 true Chr08: 2780328-2791834 Glycine max
Glyma.08G035000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2781835-2791834 Glycine max
Glyma.08G035000 10.0kb downstream 10.0kb downstream 11507 true Chr08: 2770328-2781834 Glycine max
Glyma.08G035000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2770328-2780327 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315236 5265 Fabidae View MSA
124069565 5270 Rosid View MSA
123746579 5271 Pentapetalae View MSA
122788130 5272 Eudicot View MSA
122049485 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.05791 0.0 6.98002    
cufflinks 3.0807 0.0 9.98031    
cufflinks 1.08854 0.0 3.92481    
cufflinks 0.542853 0.0 2.02977   Low
cufflinks 3.90853 0.0 12.0807   High
cufflinks 2.37922 0.0 7.91431    
cufflinks 1.52284 0.0 5.31538    
cufflinks 1.68891 0.0 5.86466    
cufflinks 0.37184 0.0 1.41145   Low
cufflinks 12.791     High High
cufflinks 0.313        
cufflinks 1.739        
cufflinks 1.507        
cufflinks 2.55        
cufflinks 0.025     Low Low
cufflinks 3.734        
cufflinks 4.245        
cufflinks 2.749        
cufflinks 0.857        
cufflinks 1.259        
cufflinks 0.395        
cufflinks 2.732        
cufflinks 3.944        
cufflinks 0.103       Low
cufflinks 1.96        
cufflinks 0.411        

0 Strain