Gene : Glyma.07G268200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12663:SF0 - PDS5 Genomic Order:  2682
Name:  ? Glyma.07G268200 Secondary Identifier:  ? PAC:30494472
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G268200 0.5kb upstream 0.5kb upstream 16776 true Chr07: 44139810-44156585 Glycine max
Glyma.07G268200 0.5kb upstream 0.5kb upstream 500 false Chr07: 44139810-44140309 Glycine max
Glyma.07G268200 0.5kb downstream 0.5kb downstream 16776 true Chr07: 44140310-44157085 Glycine max
Glyma.07G268200 0.5kb downstream 0.5kb downstream 500 false Chr07: 44156586-44157085 Glycine max
Glyma.07G268200 1.0kb upstream 1.0kb upstream 17276 true Chr07: 44139310-44156585 Glycine max
Glyma.07G268200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 44139310-44140309 Glycine max
Glyma.07G268200 1.0kb downstream 1.0kb downstream 17276 true Chr07: 44140310-44157585 Glycine max
Glyma.07G268200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 44156586-44157585 Glycine max
Glyma.07G268200 2.0kb upstream 2.0kb upstream 18276 true Chr07: 44138310-44156585 Glycine max
Glyma.07G268200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 44138310-44140309 Glycine max
Glyma.07G268200 2.0kb downstream 2.0kb downstream 18276 true Chr07: 44140310-44158585 Glycine max
Glyma.07G268200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 44156586-44158585 Glycine max
Glyma.07G268200 5.0kb upstream 5.0kb upstream 21276 true Chr07: 44135310-44156585 Glycine max
Glyma.07G268200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 44135310-44140309 Glycine max
Glyma.07G268200 5.0kb downstream 5.0kb downstream 21276 true Chr07: 44140310-44161585 Glycine max
Glyma.07G268200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 44156586-44161585 Glycine max
Glyma.07G268200 10.0kb upstream 10.0kb upstream 26276 true Chr07: 44130310-44156585 Glycine max
Glyma.07G268200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 44130310-44140309 Glycine max
Glyma.07G268200 10.0kb downstream 10.0kb downstream 26276 true Chr07: 44140310-44166585 Glycine max
Glyma.07G268200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 44156586-44166585 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313957 5265 Fabidae View MSA
124050365 5270 Rosid View MSA
123751291 5271 Pentapetalae View MSA
122791249 5272 Eudicot View MSA
122045093 5273 Angiosperm View MSA
121348998 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5711 0.0 57.8077    
cufflinks 11.2128 0.0 46.9542    
cufflinks 21.8102 0.0 101.325 High High
cufflinks 8.27145 0.0 32.8056    
cufflinks 7.56951 0.0 29.6663    
cufflinks 5.43652 0.0 18.944   Low
cufflinks 11.8317 0.0 44.4041    
cufflinks 6.74539 0.0 23.3581    
cufflinks 9.13989 0.0 36.6318    
cufflinks 1.162       Low
cufflinks 2.564        
cufflinks 2.624        
cufflinks 1.366       Low
cufflinks 1.448       Low
cufflinks 2.752        
cufflinks 2.633        
cufflinks 1.232       Low
cufflinks 2.395        
cufflinks 1.856        
cufflinks 3.128       High
cufflinks 1.847        
cufflinks 2.916       High
cufflinks 2.232        
cufflinks 2.266        
cufflinks 2.776        
cufflinks 1.773        

0 Strain