Gene : Glyma.08G002700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  27
Name:  ? Glyma.08G002700 Secondary Identifier:  ? PAC:30539352
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2724 Glycine max pathologic  
Gmax PWY-6054 Glycine max pathologic  
Gmax PWY66-21 Glycine max pathologic  
Gmax PWY66-389 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G002700 0.5kb upstream 0.5kb upstream 5632 true Chr08: 195874-201505 Glycine max
Glyma.08G002700 0.5kb upstream 0.5kb upstream 500 false Chr08: 201006-201505 Glycine max
Glyma.08G002700 0.5kb downstream 0.5kb downstream 5632 true Chr08: 195374-201005 Glycine max
Glyma.08G002700 0.5kb downstream 0.5kb downstream 500 false Chr08: 195374-195873 Glycine max
Glyma.08G002700 1.0kb upstream 1.0kb upstream 6132 true Chr08: 195874-202005 Glycine max
Glyma.08G002700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 201006-202005 Glycine max
Glyma.08G002700 1.0kb downstream 1.0kb downstream 6132 true Chr08: 194874-201005 Glycine max
Glyma.08G002700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 194874-195873 Glycine max
Glyma.08G002700 2.0kb upstream 2.0kb upstream 7132 true Chr08: 195874-203005 Glycine max
Glyma.08G002700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 201006-203005 Glycine max
Glyma.08G002700 2.0kb downstream 2.0kb downstream 7132 true Chr08: 193874-201005 Glycine max
Glyma.08G002700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 193874-195873 Glycine max
Glyma.08G002700 5.0kb upstream 5.0kb upstream 10132 true Chr08: 195874-206005 Glycine max
Glyma.08G002700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 201006-206005 Glycine max
Glyma.08G002700 5.0kb downstream 5.0kb downstream 10132 true Chr08: 190874-201005 Glycine max
Glyma.08G002700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 190874-195873 Glycine max
Glyma.08G002700 10.0kb upstream 10.0kb upstream 15132 true Chr08: 195874-211005 Glycine max
Glyma.08G002700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 201006-211005 Glycine max
Glyma.08G002700 10.0kb downstream 10.0kb downstream 15132 true Chr08: 185874-201005 Glycine max
Glyma.08G002700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 185874-195873 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303968 5265 Fabidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.3193 0.0 185.608 High  
cufflinks 81.3129 0.0 253.705 High  
cufflinks 23.3019 0.0 62.9863 High  
cufflinks 89.4833 0.0 284.787 High High
cufflinks 4.90956 0.0 13.9661   Low
cufflinks 3.62809 0.0 10.6925   Low
cufflinks 65.3631 0.0 195.721 High  
cufflinks 25.5232 0.0 69.2217 High  
cufflinks 4.22072 0.0 12.1859   Low
cufflinks 17.665     High  
cufflinks 0.129       Low
cufflinks 34.287     High  
cufflinks 0.226       Low
cufflinks 0.213       Low
cufflinks 0.41        
cufflinks 17.261     High  
cufflinks 1.545        
cufflinks 41.054     High High
cufflinks 33.978     High  
cufflinks 24.994     High  
cufflinks 0.327       Low
cufflinks 24.309     High  
cufflinks 52.355     High High
cufflinks 0.32       Low
cufflinks 19.849     High  
cufflinks 0.398        

0 Strain