Gene : Glyma.07G261700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15822 - TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN Genomic Order:  2617
Name:  ? Glyma.07G261700 Secondary Identifier:  ? PAC:30491984
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G261700 0.5kb upstream 0.5kb upstream 2675 true Chr07: 43663619-43666293 Glycine max
Glyma.07G261700 0.5kb upstream 0.5kb upstream 500 false Chr07: 43663619-43664118 Glycine max
Glyma.07G261700 0.5kb downstream 0.5kb downstream 2675 true Chr07: 43664119-43666793 Glycine max
Glyma.07G261700 0.5kb downstream 0.5kb downstream 500 false Chr07: 43666294-43666793 Glycine max
Glyma.07G261700 1.0kb upstream 1.0kb upstream 3175 true Chr07: 43663119-43666293 Glycine max
Glyma.07G261700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 43663119-43664118 Glycine max
Glyma.07G261700 1.0kb downstream 1.0kb downstream 3175 true Chr07: 43664119-43667293 Glycine max
Glyma.07G261700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 43666294-43667293 Glycine max
Glyma.07G261700 2.0kb upstream 2.0kb upstream 4175 true Chr07: 43662119-43666293 Glycine max
Glyma.07G261700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 43662119-43664118 Glycine max
Glyma.07G261700 2.0kb downstream 2.0kb downstream 4175 true Chr07: 43664119-43668293 Glycine max
Glyma.07G261700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 43666294-43668293 Glycine max
Glyma.07G261700 5.0kb upstream 5.0kb upstream 7175 true Chr07: 43659119-43666293 Glycine max
Glyma.07G261700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 43659119-43664118 Glycine max
Glyma.07G261700 5.0kb downstream 5.0kb downstream 7175 true Chr07: 43664119-43671293 Glycine max
Glyma.07G261700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 43666294-43671293 Glycine max
Glyma.07G261700 10.0kb upstream 10.0kb upstream 12175 true Chr07: 43654119-43666293 Glycine max
Glyma.07G261700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 43654119-43664118 Glycine max
Glyma.07G261700 10.0kb downstream 10.0kb downstream 12175 true Chr07: 43664119-43676293 Glycine max
Glyma.07G261700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 43666294-43676293 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307243 5265 Fabidae View MSA
124064714 5270 Rosid View MSA
123741273 5271 Pentapetalae View MSA
122791807 5272 Eudicot View MSA
122051120 5273 Angiosperm View MSA
121347902 5274 Embryophyte View MSA
123426813 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.33423 0.0 4.65033   Low
cufflinks 8.38705 0.0 23.2843   High
cufflinks 1.53964 0.0 5.29969   Low
cufflinks 3.58082 0.0 11.0127    
cufflinks 2.77164 0.0 8.83109    
cufflinks 2.12824 0.0 7.03485    
cufflinks 3.52223 0.0 10.8536    
cufflinks 2.53958 0.0 8.19695    
cufflinks 2.07201 0.0 6.88739    
cufflinks 1.84        
cufflinks 0.703       Low
cufflinks 2.367        
cufflinks 2.514        
cufflinks 3.044        
cufflinks 0.51       Low
cufflinks 3.303        
cufflinks 0.908        
cufflinks 1.839        
cufflinks 10.934     High High
cufflinks 1.585        
cufflinks 0.625       Low
cufflinks 2.231        
cufflinks 5.201       High
cufflinks 0.895        
cufflinks 1.931        
cufflinks 1.448        

0 Strain