Gene : Glyma.07G213500 G. max Wm82.a2.v1
Defline:  (1 of 4) 6.4.1.4 - Methylcrotonoyl-CoA carboxylase / Methylcrotonyl-CoA carboxylase Genomic Order:  2135
Name:  ? Glyma.07G213500 Secondary Identifier:  ? PAC:30494548
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LEU-DEG2-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G213500 0.5kb upstream 0.5kb upstream 5833 true Chr07: 38555864-38561696 Glycine max
Glyma.07G213500 0.5kb upstream 0.5kb upstream 500 false Chr07: 38555864-38556363 Glycine max
Glyma.07G213500 0.5kb downstream 0.5kb downstream 5833 true Chr07: 38556364-38562196 Glycine max
Glyma.07G213500 0.5kb downstream 0.5kb downstream 500 false Chr07: 38561697-38562196 Glycine max
Glyma.07G213500 1.0kb upstream 1.0kb upstream 6333 true Chr07: 38555364-38561696 Glycine max
Glyma.07G213500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38555364-38556363 Glycine max
Glyma.07G213500 1.0kb downstream 1.0kb downstream 6333 true Chr07: 38556364-38562696 Glycine max
Glyma.07G213500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38561697-38562696 Glycine max
Glyma.07G213500 2.0kb upstream 2.0kb upstream 7333 true Chr07: 38554364-38561696 Glycine max
Glyma.07G213500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38554364-38556363 Glycine max
Glyma.07G213500 2.0kb downstream 2.0kb downstream 7333 true Chr07: 38556364-38563696 Glycine max
Glyma.07G213500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38561697-38563696 Glycine max
Glyma.07G213500 5.0kb upstream 5.0kb upstream 10333 true Chr07: 38551364-38561696 Glycine max
Glyma.07G213500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38551364-38556363 Glycine max
Glyma.07G213500 5.0kb downstream 5.0kb downstream 10333 true Chr07: 38556364-38566696 Glycine max
Glyma.07G213500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38561697-38566696 Glycine max
Glyma.07G213500 10.0kb upstream 10.0kb upstream 15333 true Chr07: 38546364-38561696 Glycine max
Glyma.07G213500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38546364-38556363 Glycine max
Glyma.07G213500 10.0kb downstream 10.0kb downstream 15333 true Chr07: 38556364-38571696 Glycine max
Glyma.07G213500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38561697-38571696 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303334 5265 Fabidae View MSA
124061199 5270 Rosid View MSA
123740620 5271 Pentapetalae View MSA
122793626 5272 Eudicot View MSA
122044864 5273 Angiosperm View MSA
121344064 5274 Embryophyte View MSA
123424408 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.7125 0.0 132.87 High  
cufflinks 13.9861 0.0 51.8663   Low
cufflinks 57.6838 0.0 250.043 High High
cufflinks 22.6369 0.0 77.8557 High  
cufflinks 25.5209 0.0 99.7539 High  
cufflinks 25.3396 0.0 89.2866 High  
cufflinks 15.675 0.0 58.5552   Low
cufflinks 23.5303 0.0 81.1545 High  
cufflinks 36.2925 0.0 152.426 High  
cufflinks 2.877        
cufflinks 24.203     High High
cufflinks 8.142     High  
cufflinks 3.522        
cufflinks 3.446        
cufflinks 14.879     High High
cufflinks 3.375        
cufflinks 2.371       Low
cufflinks 3.645        
cufflinks 2.527        
cufflinks 5.196        
cufflinks 9.814     High  
cufflinks 3.486        
cufflinks 1.638       Low
cufflinks 16.623     High High
cufflinks 4.582        
cufflinks 5.082        

0 Strain