Gene : Glyma.07G228400 G. max Wm82.a2.v1

Defline:  (1 of 8) PTHR10783:SF43 - PHOSPHATE TRANSPORTER PHO1 HOMOLOG 2-RELATED Genomic Order:  2284
Name:  ? Glyma.07G228400 Secondary Identifier:  ? PAC:30495294

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G228400 0.5kb upstream 0.5kb upstream 7266 true Chr07: 40690912-40698177 Glycine max
Glyma.07G228400 0.5kb upstream 0.5kb upstream 500 false Chr07: 40690912-40691411 Glycine max
Glyma.07G228400 0.5kb downstream 0.5kb downstream 7266 true Chr07: 40691412-40698677 Glycine max
Glyma.07G228400 0.5kb downstream 0.5kb downstream 500 false Chr07: 40698178-40698677 Glycine max
Glyma.07G228400 1.0kb upstream 1.0kb upstream 7766 true Chr07: 40690412-40698177 Glycine max
Glyma.07G228400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 40690412-40691411 Glycine max
Glyma.07G228400 1.0kb downstream 1.0kb downstream 7766 true Chr07: 40691412-40699177 Glycine max
Glyma.07G228400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 40698178-40699177 Glycine max
Glyma.07G228400 2.0kb upstream 2.0kb upstream 8766 true Chr07: 40689412-40698177 Glycine max
Glyma.07G228400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 40689412-40691411 Glycine max
Glyma.07G228400 2.0kb downstream 2.0kb downstream 8766 true Chr07: 40691412-40700177 Glycine max
Glyma.07G228400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 40698178-40700177 Glycine max
Glyma.07G228400 5.0kb upstream 5.0kb upstream 11766 true Chr07: 40686412-40698177 Glycine max
Glyma.07G228400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 40686412-40691411 Glycine max
Glyma.07G228400 5.0kb downstream 5.0kb downstream 11766 true Chr07: 40691412-40703177 Glycine max
Glyma.07G228400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 40698178-40703177 Glycine max
Glyma.07G228400 10.0kb upstream 10.0kb upstream 16766 true Chr07: 40681412-40698177 Glycine max
Glyma.07G228400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 40681412-40691411 Glycine max
Glyma.07G228400 10.0kb downstream 10.0kb downstream 16766 true Chr07: 40691412-40708177 Glycine max
Glyma.07G228400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 40698178-40708177 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254704 5265 Fabidae View MSA
124069601 5270 Rosid View MSA
123750441 5271 Pentapetalae View MSA
122794011 5272 Eudicot View MSA
122046930 5273 Angiosperm View MSA
121348635 5274 Embryophyte View MSA
123427952 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.747836 0.0 2.98678   Low
cufflinks 9.8776 0.0 35.2087    
cufflinks 4.77023 0.0 18.2396    
cufflinks 7.52599 0.0 27.0908    
cufflinks 13.0105 0.0 46.4311   High
cufflinks 2.20055 0.0 9.27546    
cufflinks 4.70741 0.0 18.1825    
cufflinks 3.85285 0.0 15.6986    
cufflinks 4.59137 0.0 17.83    
cufflinks 1.323        
cufflinks 0.495        
cufflinks 2.426       High
cufflinks 1.451        
cufflinks 1.932        
cufflinks 1.472        
cufflinks 0.723        
cufflinks 0.357       Low
cufflinks 3.834       High
cufflinks 3.213       High
cufflinks 0.461        
cufflinks 0.596        
cufflinks 0.555        
cufflinks 0.8        
cufflinks 0.246       Low
cufflinks 0.655        
cufflinks 0.554        

0 Strain