Gene : Glyma.07G202200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31384:SF5 - AUXIN RESPONSE FACTOR 3 Genomic Order:  2022
Name:  ? Glyma.07G202200 Secondary Identifier:  ? PAC:30492619
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G202200 0.5kb upstream 0.5kb upstream 6420 true Chr07: 37125021-37131440 Glycine max
Glyma.07G202200 0.5kb upstream 0.5kb upstream 500 false Chr07: 37130941-37131440 Glycine max
Glyma.07G202200 0.5kb downstream 0.5kb downstream 6420 true Chr07: 37124521-37130940 Glycine max
Glyma.07G202200 0.5kb downstream 0.5kb downstream 500 false Chr07: 37124521-37125020 Glycine max
Glyma.07G202200 1.0kb upstream 1.0kb upstream 6920 true Chr07: 37125021-37131940 Glycine max
Glyma.07G202200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37130941-37131940 Glycine max
Glyma.07G202200 1.0kb downstream 1.0kb downstream 6920 true Chr07: 37124021-37130940 Glycine max
Glyma.07G202200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37124021-37125020 Glycine max
Glyma.07G202200 2.0kb upstream 2.0kb upstream 7920 true Chr07: 37125021-37132940 Glycine max
Glyma.07G202200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37130941-37132940 Glycine max
Glyma.07G202200 2.0kb downstream 2.0kb downstream 7920 true Chr07: 37123021-37130940 Glycine max
Glyma.07G202200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37123021-37125020 Glycine max
Glyma.07G202200 5.0kb upstream 5.0kb upstream 10920 true Chr07: 37125021-37135940 Glycine max
Glyma.07G202200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37130941-37135940 Glycine max
Glyma.07G202200 5.0kb downstream 5.0kb downstream 10920 true Chr07: 37120021-37130940 Glycine max
Glyma.07G202200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37120021-37125020 Glycine max
Glyma.07G202200 10.0kb upstream 10.0kb upstream 15920 true Chr07: 37125021-37140940 Glycine max
Glyma.07G202200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37130941-37140940 Glycine max
Glyma.07G202200 10.0kb downstream 10.0kb downstream 15920 true Chr07: 37115021-37130940 Glycine max
Glyma.07G202200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37115021-37125020 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309697 5265 Fabidae View MSA
124066070 5270 Rosid View MSA
123743796 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.708333 0.0 2.46222   Low
cufflinks 12.8113 0.0 34.255   High
cufflinks 1.07085 0.0 3.54336   Low
cufflinks 5.19433 0.0 14.1914    
cufflinks 4.19628 0.0 11.6683    
cufflinks 2.03246 0.0 6.16761    
cufflinks 4.63366 0.0 12.7787    
cufflinks 8.21197 0.0 21.9639    
cufflinks 3.66705 0.0 10.323    
cufflinks 5.237       High
cufflinks 0.3       Low
cufflinks 1.438        
cufflinks 1.612        
cufflinks 1.252        
cufflinks 0.467       Low
cufflinks 2.321        
cufflinks 0.649        
cufflinks 3.148        
cufflinks 9.078     High High
cufflinks 1.577        
cufflinks 0.616        
cufflinks 2.292        
cufflinks 2.273        
cufflinks 0.656        
cufflinks 1.86        
cufflinks 0.404       Low

0 Strain