Gene : Glyma.07G208100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23012//PTHR23012:SF94 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  2081
Name:  ? Glyma.07G208100 Secondary Identifier:  ? PAC:30494546
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G208100 0.5kb upstream 0.5kb upstream 5053 true Chr07: 37783731-37788783 Glycine max
Glyma.07G208100 0.5kb upstream 0.5kb upstream 500 false Chr07: 37788284-37788783 Glycine max
Glyma.07G208100 0.5kb downstream 0.5kb downstream 5053 true Chr07: 37783231-37788283 Glycine max
Glyma.07G208100 0.5kb downstream 0.5kb downstream 500 false Chr07: 37783231-37783730 Glycine max
Glyma.07G208100 1.0kb upstream 1.0kb upstream 5553 true Chr07: 37783731-37789283 Glycine max
Glyma.07G208100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37788284-37789283 Glycine max
Glyma.07G208100 1.0kb downstream 1.0kb downstream 5553 true Chr07: 37782731-37788283 Glycine max
Glyma.07G208100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37782731-37783730 Glycine max
Glyma.07G208100 2.0kb upstream 2.0kb upstream 6553 true Chr07: 37783731-37790283 Glycine max
Glyma.07G208100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37788284-37790283 Glycine max
Glyma.07G208100 2.0kb downstream 2.0kb downstream 6553 true Chr07: 37781731-37788283 Glycine max
Glyma.07G208100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37781731-37783730 Glycine max
Glyma.07G208100 5.0kb upstream 5.0kb upstream 9553 true Chr07: 37783731-37793283 Glycine max
Glyma.07G208100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37788284-37793283 Glycine max
Glyma.07G208100 5.0kb downstream 5.0kb downstream 9553 true Chr07: 37778731-37788283 Glycine max
Glyma.07G208100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37778731-37783730 Glycine max
Glyma.07G208100 10.0kb upstream 10.0kb upstream 14553 true Chr07: 37783731-37798283 Glycine max
Glyma.07G208100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37788284-37798283 Glycine max
Glyma.07G208100 10.0kb downstream 10.0kb downstream 14553 true Chr07: 37773731-37788283 Glycine max
Glyma.07G208100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37773731-37783730 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250502 5265 Fabidae View MSA
124070525 5270 Rosid View MSA
123751414 5271 Pentapetalae View MSA
122787187 5272 Eudicot View MSA
122048569 5273 Angiosperm View MSA
121311024 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.431941 0.0 2.86605   Low
cufflinks 3.43666 0.0 15.49   High
cufflinks 0.617352 0.0 5.11422   Low
cufflinks 1.25242 0.0 5.43913    
cufflinks 1.599 0.0 8.98945    
cufflinks 0.991751 0.0 4.49092    
cufflinks 2.08282 0.0 10.9039    
cufflinks 2.1001 0.0 7.91393    
cufflinks 2.48646 0.0 8.96383    
cufflinks 0.134        
cufflinks 0.021     Low Low
cufflinks 0.321        
cufflinks 0.317        
cufflinks 0.256        
cufflinks 0.064        
cufflinks 0.256        
cufflinks 0.098        
cufflinks 0.24        
cufflinks 0.785       High
cufflinks 0.092     Low  
cufflinks 0.033     Low Low
cufflinks 0.15        
cufflinks 0.299        
cufflinks 0.021     Low Low
cufflinks 0.122        
cufflinks 0.064     Low  

0 Strain