Gene : Glyma.07G150500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Genomic Order:  1505
Name:  ? Glyma.07G150500 Secondary Identifier:  ? PAC:30493888
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G150500 0.5kb upstream 0.5kb upstream 4500 true Chr07: 18115920-18120419 Glycine max
Glyma.07G150500 0.5kb upstream 0.5kb upstream 500 false Chr07: 18115920-18116419 Glycine max
Glyma.07G150500 0.5kb downstream 0.5kb downstream 4500 true Chr07: 18116420-18120919 Glycine max
Glyma.07G150500 0.5kb downstream 0.5kb downstream 500 false Chr07: 18120420-18120919 Glycine max
Glyma.07G150500 1.0kb upstream 1.0kb upstream 5000 true Chr07: 18115420-18120419 Glycine max
Glyma.07G150500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 18115420-18116419 Glycine max
Glyma.07G150500 1.0kb downstream 1.0kb downstream 5000 true Chr07: 18116420-18121419 Glycine max
Glyma.07G150500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 18120420-18121419 Glycine max
Glyma.07G150500 2.0kb upstream 2.0kb upstream 6000 true Chr07: 18114420-18120419 Glycine max
Glyma.07G150500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 18114420-18116419 Glycine max
Glyma.07G150500 2.0kb downstream 2.0kb downstream 6000 true Chr07: 18116420-18122419 Glycine max
Glyma.07G150500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 18120420-18122419 Glycine max
Glyma.07G150500 5.0kb upstream 5.0kb upstream 9000 true Chr07: 18111420-18120419 Glycine max
Glyma.07G150500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 18111420-18116419 Glycine max
Glyma.07G150500 5.0kb downstream 5.0kb downstream 9000 true Chr07: 18116420-18125419 Glycine max
Glyma.07G150500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 18120420-18125419 Glycine max
Glyma.07G150500 10.0kb upstream 10.0kb upstream 14000 true Chr07: 18106420-18120419 Glycine max
Glyma.07G150500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 18106420-18116419 Glycine max
Glyma.07G150500 10.0kb downstream 10.0kb downstream 14000 true Chr07: 18116420-18130419 Glycine max
Glyma.07G150500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 18120420-18130419 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122792833 5272 Eudicot View MSA
122299280 5265 Fabidae View MSA
124070780 5270 Rosid View MSA
123741557 5271 Pentapetalae View MSA
122042274 5273 Angiosperm View MSA
121349312 5274 Embryophyte View MSA
123381271 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.15158 0.0 6.4036    
cufflinks 1.94902 0.0 9.54238    
cufflinks 6.1379 0.0 21.7594   High
cufflinks 3.84417 0.0 15.7998    
cufflinks 0.329213 0.0 1.62722    
cufflinks 0.147833 0.0 0.583453 Low Low
cufflinks 7.78421 0.0 27.0298   High
cufflinks 0.4665 0.0 3.11123    
cufflinks 0.348391 0.0 1.68367    
cufflinks 0.314        
cufflinks 0.122        
cufflinks 1.278        
cufflinks 0.034     Low Low
cufflinks 0.002     Low Low
cufflinks 0.224        
cufflinks 0.728        
cufflinks 0.292        
cufflinks 3.944       High
cufflinks 0.642        
cufflinks 0.813        
cufflinks 0.214        
cufflinks 0.863        
cufflinks 0.653        
cufflinks 0.047     Low  
cufflinks 0.535        
cufflinks 0.123        

0 Strain