Gene : Glyma.07G155900 G. max Wm82.a2.v1
Defline:  (1 of 5) KOG1740 - Predicted mitochondrial/chloroplast ribosomal protein S17 Genomic Order:  1559
Name:  ? Glyma.07G155900 Secondary Identifier:  ? PAC:30493938
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G155900 0.5kb upstream 0.5kb upstream 2717 true Chr07: 19177196-19179912 Glycine max
Glyma.07G155900 0.5kb upstream 0.5kb upstream 500 false Chr07: 19177196-19177695 Glycine max
Glyma.07G155900 0.5kb downstream 0.5kb downstream 2717 true Chr07: 19177696-19180412 Glycine max
Glyma.07G155900 0.5kb downstream 0.5kb downstream 500 false Chr07: 19179913-19180412 Glycine max
Glyma.07G155900 1.0kb upstream 1.0kb upstream 3217 true Chr07: 19176696-19179912 Glycine max
Glyma.07G155900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 19176696-19177695 Glycine max
Glyma.07G155900 1.0kb downstream 1.0kb downstream 3217 true Chr07: 19177696-19180912 Glycine max
Glyma.07G155900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 19179913-19180912 Glycine max
Glyma.07G155900 2.0kb upstream 2.0kb upstream 4217 true Chr07: 19175696-19179912 Glycine max
Glyma.07G155900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 19175696-19177695 Glycine max
Glyma.07G155900 2.0kb downstream 2.0kb downstream 4217 true Chr07: 19177696-19181912 Glycine max
Glyma.07G155900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 19179913-19181912 Glycine max
Glyma.07G155900 5.0kb upstream 5.0kb upstream 7217 true Chr07: 19172696-19179912 Glycine max
Glyma.07G155900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 19172696-19177695 Glycine max
Glyma.07G155900 5.0kb downstream 5.0kb downstream 7217 true Chr07: 19177696-19184912 Glycine max
Glyma.07G155900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 19179913-19184912 Glycine max
Glyma.07G155900 10.0kb upstream 10.0kb upstream 12217 true Chr07: 19167696-19179912 Glycine max
Glyma.07G155900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 19167696-19177695 Glycine max
Glyma.07G155900 10.0kb downstream 10.0kb downstream 12217 true Chr07: 19177696-19189912 Glycine max
Glyma.07G155900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 19179913-19189912 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301033 5265 Fabidae View MSA
124063542 5270 Rosid View MSA
123744369 5271 Pentapetalae View MSA
122786157 5272 Eudicot View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.2658 0.0 58.4809    
cufflinks 18.8768 0.0 52.3372    
cufflinks 9.25378 0.0 27.9244   Low
cufflinks 12.6466 0.0 36.6854    
cufflinks 24.7609 0.0 67.3628 High  
cufflinks 14.0536 0.0 40.2132    
cufflinks 46.6869 0.0 124.556 High High
cufflinks 15.1312 0.0 42.897    
cufflinks 19.8044 0.0 54.6493 High  
cufflinks 3.468        
cufflinks 2.834        
cufflinks 3.957        
cufflinks 7.92     High High
cufflinks 11.655     High High
cufflinks 3.457        
cufflinks 4.345        
cufflinks 2.568       Low
cufflinks 4.56        
cufflinks 5.09        
cufflinks 4.759        
cufflinks 2.102       Low
cufflinks 4.486        
cufflinks 4.401        
cufflinks 2.943        
cufflinks 4.68        
cufflinks 3.906        

0 Strain