Gene : Glyma.07G153000 G. max Wm82.a2.v1
Defline:  (1 of 1) PF03004//PF13963 - Plant transposase (Ptta/En/Spm family) (Transposase_24) // Transposase-associated domain (Transpos_assoc) Genomic Order:  1530
Name:  ? Glyma.07G153000 Secondary Identifier:  ? PAC:30495439
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G153000 0.5kb upstream 0.5kb upstream 5439 true Chr07: 18666145-18671583 Glycine max
Glyma.07G153000 0.5kb upstream 0.5kb upstream 500 false Chr07: 18671084-18671583 Glycine max
Glyma.07G153000 0.5kb downstream 0.5kb downstream 5439 true Chr07: 18665645-18671083 Glycine max
Glyma.07G153000 0.5kb downstream 0.5kb downstream 500 false Chr07: 18665645-18666144 Glycine max
Glyma.07G153000 1.0kb upstream 1.0kb upstream 5939 true Chr07: 18666145-18672083 Glycine max
Glyma.07G153000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 18671084-18672083 Glycine max
Glyma.07G153000 1.0kb downstream 1.0kb downstream 5939 true Chr07: 18665145-18671083 Glycine max
Glyma.07G153000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 18665145-18666144 Glycine max
Glyma.07G153000 2.0kb upstream 2.0kb upstream 6939 true Chr07: 18666145-18673083 Glycine max
Glyma.07G153000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 18671084-18673083 Glycine max
Glyma.07G153000 2.0kb downstream 2.0kb downstream 6939 true Chr07: 18664145-18671083 Glycine max
Glyma.07G153000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 18664145-18666144 Glycine max
Glyma.07G153000 5.0kb upstream 5.0kb upstream 9939 true Chr07: 18666145-18676083 Glycine max
Glyma.07G153000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 18671084-18676083 Glycine max
Glyma.07G153000 5.0kb downstream 5.0kb downstream 9939 true Chr07: 18661145-18671083 Glycine max
Glyma.07G153000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 18661145-18666144 Glycine max
Glyma.07G153000 10.0kb upstream 10.0kb upstream 14939 true Chr07: 18666145-18681083 Glycine max
Glyma.07G153000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 18671084-18681083 Glycine max
Glyma.07G153000 10.0kb downstream 10.0kb downstream 14939 true Chr07: 18656145-18671083 Glycine max
Glyma.07G153000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 18656145-18666144 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615105 5273 Angiosperm Singleton cluster - no MSA
122249794 5265 Fabidae Singleton cluster - no MSA
123993170 5270 Rosid Singleton cluster - no MSA
123567975 5271 Pentapetalae Singleton cluster - no MSA
122602722 5272 Eudicot Singleton cluster - no MSA
120887302 5274 Embryophyte Singleton cluster - no MSA
122928060 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.96266 0.0 13.875   High
cufflinks 3.42147 0.0 12.3568    
cufflinks 3.39949 0.0 12.3387    
cufflinks 2.58943 0.0 7.82999    
cufflinks 2.67441 0.0 8.09585    
cufflinks 2.43835 0.0 7.50371    
cufflinks 2.16129 0.0 9.24199   Low
cufflinks 2.49273 0.0 7.59135    
cufflinks 2.73963 0.0 8.23162    
cufflinks 0.414       Low
cufflinks 0.499        
cufflinks 0.837       High
cufflinks 0.608        
cufflinks 0.652        
cufflinks 0.423       Low
cufflinks 0.76        
cufflinks 0.421       Low
cufflinks 0.911       High
cufflinks 0.752        
cufflinks 0.774        
cufflinks 0.554        
cufflinks 0.823       High
cufflinks 0.85       High
cufflinks 0.483        
cufflinks 0.601        
cufflinks 0.66        

0 Strain