Gene : Glyma.07G118800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11937:SF235 - ACTIN-LIKE PROTEIN 6A Genomic Order:  1188
Name:  ? Glyma.07G118800 Secondary Identifier:  ? PAC:30493595
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G118800 0.5kb upstream 0.5kb upstream 20051 true Chr07: 13518693-13538743 Glycine max
Glyma.07G118800 0.5kb upstream 0.5kb upstream 500 false Chr07: 13518693-13519192 Glycine max
Glyma.07G118800 0.5kb downstream 0.5kb downstream 20051 true Chr07: 13519193-13539243 Glycine max
Glyma.07G118800 0.5kb downstream 0.5kb downstream 500 false Chr07: 13538744-13539243 Glycine max
Glyma.07G118800 1.0kb upstream 1.0kb upstream 20551 true Chr07: 13518193-13538743 Glycine max
Glyma.07G118800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 13518193-13519192 Glycine max
Glyma.07G118800 1.0kb downstream 1.0kb downstream 20551 true Chr07: 13519193-13539743 Glycine max
Glyma.07G118800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 13538744-13539743 Glycine max
Glyma.07G118800 2.0kb upstream 2.0kb upstream 21551 true Chr07: 13517193-13538743 Glycine max
Glyma.07G118800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 13517193-13519192 Glycine max
Glyma.07G118800 2.0kb downstream 2.0kb downstream 21551 true Chr07: 13519193-13540743 Glycine max
Glyma.07G118800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 13538744-13540743 Glycine max
Glyma.07G118800 5.0kb upstream 5.0kb upstream 24551 true Chr07: 13514193-13538743 Glycine max
Glyma.07G118800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 13514193-13519192 Glycine max
Glyma.07G118800 5.0kb downstream 5.0kb downstream 24551 true Chr07: 13519193-13543743 Glycine max
Glyma.07G118800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 13538744-13543743 Glycine max
Glyma.07G118800 10.0kb upstream 10.0kb upstream 29551 true Chr07: 13509193-13538743 Glycine max
Glyma.07G118800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 13509193-13519192 Glycine max
Glyma.07G118800 10.0kb downstream 10.0kb downstream 29551 true Chr07: 13519193-13548743 Glycine max
Glyma.07G118800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 13538744-13548743 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300268 5265 Fabidae View MSA
124063804 5270 Rosid View MSA
123743517 5271 Pentapetalae View MSA
122788412 5272 Eudicot View MSA
122043885 5273 Angiosperm View MSA
121347268 5274 Embryophyte View MSA
123426556 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8519 0.0 45.2779    
cufflinks 22.0995 0.0 83.2801 High High
cufflinks 14.406 0.0 53.4106    
cufflinks 12.6322 0.0 47.4306    
cufflinks 14.3135 0.0 53.5475    
cufflinks 11.5101 0.0 37.676    
cufflinks 9.38818 0.0 36.1086   Low
cufflinks 12.3502 0.0 46.2589    
cufflinks 13.7288 0.0 51.2895    
cufflinks 0.32        
cufflinks 0.227       Low
cufflinks 0.407        
cufflinks 0.483        
cufflinks 0.584        
cufflinks 0.318        
cufflinks 0.729       High
cufflinks 0.374        
cufflinks 0.412        
cufflinks 0.706       High
cufflinks 0.668        
cufflinks 0.299       Low
cufflinks 0.66        
cufflinks 0.787       High
cufflinks 0.271       Low
cufflinks 0.684       High
cufflinks 0.341        

0 Strain