Gene : Glyma.07G100200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24056:SF0 - CYCLIN-DEPENDENT KINASE 7 Genomic Order:  1002
Name:  ? Glyma.07G100200 Secondary Identifier:  ? PAC:30491683
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.07G100200 0.5kb upstream 0.5kb upstream 6076 true Chr07: 9509361-9515436 Glycine max
Glyma.07G100200 0.5kb upstream 0.5kb upstream 500 false Chr07: 9514937-9515436 Glycine max
Glyma.07G100200 0.5kb downstream 0.5kb downstream 6076 true Chr07: 9508861-9514936 Glycine max
Glyma.07G100200 0.5kb downstream 0.5kb downstream 500 false Chr07: 9508861-9509360 Glycine max
Glyma.07G100200 1.0kb upstream 1.0kb upstream 6576 true Chr07: 9509361-9515936 Glycine max
Glyma.07G100200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 9514937-9515936 Glycine max
Glyma.07G100200 1.0kb downstream 1.0kb downstream 6576 true Chr07: 9508361-9514936 Glycine max
Glyma.07G100200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 9508361-9509360 Glycine max
Glyma.07G100200 2.0kb upstream 2.0kb upstream 7576 true Chr07: 9509361-9516936 Glycine max
Glyma.07G100200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 9514937-9516936 Glycine max
Glyma.07G100200 2.0kb downstream 2.0kb downstream 7576 true Chr07: 9507361-9514936 Glycine max
Glyma.07G100200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 9507361-9509360 Glycine max
Glyma.07G100200 5.0kb upstream 5.0kb upstream 10576 true Chr07: 9509361-9519936 Glycine max
Glyma.07G100200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 9514937-9519936 Glycine max
Glyma.07G100200 5.0kb downstream 5.0kb downstream 10576 true Chr07: 9504361-9514936 Glycine max
Glyma.07G100200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 9504361-9509360 Glycine max
Glyma.07G100200 10.0kb upstream 10.0kb upstream 15576 true Chr07: 9509361-9524936 Glycine max
Glyma.07G100200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 9514937-9524936 Glycine max
Glyma.07G100200 10.0kb downstream 10.0kb downstream 15576 true Chr07: 9499361-9514936 Glycine max
Glyma.07G100200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 9499361-9509360 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121607459 5273 Angiosperm Singleton cluster - no MSA
122238799 5265 Fabidae Singleton cluster - no MSA
123984149 5270 Rosid Singleton cluster - no MSA
123559688 5271 Pentapetalae Singleton cluster - no MSA
122594494 5272 Eudicot Singleton cluster - no MSA
120879738 5274 Embryophyte Singleton cluster - no MSA
122920611 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.06781 0.0 13.5588   Low
cufflinks 6.67797 0.0 24.9429   High
cufflinks 2.02671 0.0 9.24008   Low
cufflinks 4.21042 0.0 17.5014    
cufflinks 5.55024 0.0 21.8544    
cufflinks 4.90068 0.0 25.2916    
cufflinks 4.51979 0.0 16.0936    
cufflinks 4.83768 0.0 19.4961    
cufflinks 4.86269 0.0 19.6682    
cufflinks 0.989        
cufflinks 0.271       Low
cufflinks 0.614        
cufflinks 1.208        
cufflinks 1.485       High
cufflinks 0.253       Low
cufflinks 1.11        
cufflinks 0.461        
cufflinks 0.847        
cufflinks 1.188        
cufflinks 1.027        
cufflinks 0.332       Low
cufflinks 1.09        
cufflinks 1.78       High
cufflinks 0.313       Low
cufflinks 0.987        
cufflinks 0.264       Low

0 Strain